Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.67■□□□□ 0.58
TFF1P04155 AC099791.2-201ENST00000605725 427 ntBASIC18.67■□□□□ 0.58
TFF1P04155 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.67■□□□□ 0.58
TFF1P04155 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TFF1P04155 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.67■□□□□ 0.58
TFF1P04155 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
TFF1P04155 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFF1P04155 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.67■□□□□ 0.58
TFF1P04155 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFF1P04155 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.66■□□□□ 0.58
TFF1P04155 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TFF1P04155 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFF1P04155 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.66■□□□□ 0.58
TFF1P04155 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.66■□□□□ 0.58
TFF1P04155 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFF1P04155 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.66■□□□□ 0.58
TFF1P04155 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFF1P04155 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
TFF1P04155 LINC01529-204ENST00000636474 1715 ntBASIC18.66■□□□□ 0.58
TFF1P04155 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TFF1P04155 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.65■□□□□ 0.58
TFF1P04155 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TFF1P04155 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TFF1P04155 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TFF1P04155 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TFF1P04155 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFF1P04155 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
TFF1P04155 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TFF1P04155 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TFF1P04155 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TFF1P04155 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TFF1P04155 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TFF1P04155 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TFF1P04155 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TFF1P04155 AL136116.3-201ENST00000402907 1138 ntBASIC18.64■□□□□ 0.57
TFF1P04155 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.64■□□□□ 0.57
TFF1P04155 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TFF1P04155 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TFF1P04155 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TFF1P04155 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TFF1P04155 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.64■□□□□ 0.57
TFF1P04155 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TFF1P04155 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TFF1P04155 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TFF1P04155 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.63■□□□□ 0.57
TFF1P04155 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TFF1P04155 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TFF1P04155 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TFF1P04155 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.63■□□□□ 0.57
TFF1P04155 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TFF1P04155 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.63■□□□□ 0.57
TFF1P04155 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.63■□□□□ 0.57
TFF1P04155 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TFF1P04155 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TFF1P04155 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.63■□□□□ 0.57
TFF1P04155 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.63■□□□□ 0.57
TFF1P04155 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TFF1P04155 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TFF1P04155 SRD5A1P1-201ENST00000442297 786 ntBASIC18.62■□□□□ 0.57
TFF1P04155 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TFF1P04155 AC009086.3-201ENST00000623486 1008 ntBASIC18.62■□□□□ 0.57
TFF1P04155 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TFF1P04155 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TFF1P04155 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.62■□□□□ 0.57
TFF1P04155 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TFF1P04155 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TFF1P04155 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.62■□□□□ 0.57
TFF1P04155 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.62■□□□□ 0.57
TFF1P04155 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TFF1P04155 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TFF1P04155 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TFF1P04155 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TFF1P04155 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.61■□□□□ 0.57
TFF1P04155 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TFF1P04155 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.61■□□□□ 0.57
TFF1P04155 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TFF1P04155 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TFF1P04155 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.6■□□□□ 0.57
TFF1P04155 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms