Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 UNC93B3-201ENST00000308076 687 ntBASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AC233723.2-201ENST00000623798 2106 ntBASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AC133561.4-201ENST00000566112 224 ntBASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV4S1A1TA0A5B7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AL136162.1-201ENST00000607711 1078 ntBASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV4S1A1TA0A5B7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AC106739.1-201ENST00000617035 715 ntBASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV4S1A1TA0A5B7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRBV4S1A1TA0A5B7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV4S1A1TA0A5B7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 DUX4L19-201ENST00000557448 1267 ntBASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AC092171.4-201ENST00000609130 632 ntBASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TCRBV4S1A1TA0A5B7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AC135279.3-201ENST00000610945 1311 ntBASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AC142381.2-201ENST00000566120 298 ntBASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRBV4S1A1TA0A5B7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms