Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D3EA0A087X179 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 OR2I1P-207ENST00000453522 948 ntBASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 AL162430.1-201ENST00000480705 870 ntBASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.21■■□□□ 1.15
TBC1D3EA0A087X179 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.2■■□□□ 1.14
TBC1D3EA0A087X179 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.2■■□□□ 1.14
TBC1D3EA0A087X179 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.2■■□□□ 1.14
TBC1D3EA0A087X179 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.2■■□□□ 1.14
TBC1D3EA0A087X179 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.2■■□□□ 1.14
TBC1D3EA0A087X179 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.2■■□□□ 1.14
TBC1D3EA0A087X179 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 MIR572-201ENST00000384983 95 ntBASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D3EA0A087X179 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 AL358852.1-201ENST00000623174 1268 ntBASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 ABCB10P4-201ENST00000566803 2184 ntBASIC22.18■■□□□ 1.14
TBC1D3EA0A087X179 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D3EA0A087X179 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.16■■□□□ 1.14
TBC1D3EA0A087X179 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.16■■□□□ 1.14
TBC1D3EA0A087X179 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D3EA0A087X179 AC079630.1-202ENST00000618127 1840 ntBASIC22.16■■□□□ 1.14
TBC1D3EA0A087X179 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 YBX1P1-201ENST00000445822 960 ntBASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.15■■□□□ 1.14
TBC1D3EA0A087X179 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.14■■□□□ 1.14
TBC1D3EA0A087X179 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TBC1D3EA0A087X179 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 AC034268.1-201ENST00000441047 882 ntBASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 AP005435.1-201ENST00000529293 1178 ntBASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 MIR6084-201ENST00000622012 110 ntBASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D3EA0A087X179 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 AC012414.1-201ENST00000556676 535 ntBASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 AL354811.1-201ENST00000610286 706 ntBASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3EA0A087X179 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms