Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM56-RWDD3S4R434 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM56-RWDD3S4R434 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM56-RWDD3S4R434 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
TMEM56-RWDD3S4R434 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 AL024507.2-201ENST00000606070 2574 ntBASIC18.24■□□□□ 0.51
TMEM56-RWDD3S4R434 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 AL137060.1-201ENST00000618151 2648 ntBASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 DUX4L9-201ENST00000449051 1259 ntBASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM56-RWDD3S4R434 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 MIR4449-201ENST00000578365 66 ntBASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 AC080038.3-201ENST00000623346 1952 ntBASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 RNF126P1-201ENST00000567452 1320 ntBASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM56-RWDD3S4R434 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TMEM56-RWDD3S4R434 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM56-RWDD3S4R434 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56-RWDD3S4R434 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 AC022616.5-201ENST00000518796 181 ntBASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 AC087742.1-201ENST00000575880 1738 ntBASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 FBXW4P1-201ENST00000426721 2239 ntBASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56-RWDD3S4R434 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM56-RWDD3S4R434 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM56-RWDD3S4R434 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM56-RWDD3S4R434 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms