Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CSMD1Q96PZ7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 RPS2P52-201ENST00000469610 820 ntBASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD1Q96PZ7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 AC087239.1-201ENST00000622671 572 ntBASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CSMD1Q96PZ7 AC091060.1-201ENST00000623524 1766 ntBASIC19.16■□□□□ 0.66
CSMD1Q96PZ7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSMD1Q96PZ7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSMD1Q96PZ7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.16■□□□□ 0.66
CSMD1Q96PZ7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.16■□□□□ 0.66
CSMD1Q96PZ7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSMD1Q96PZ7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSMD1Q96PZ7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.14■□□□□ 0.66
CSMD1Q96PZ7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.14■□□□□ 0.66
CSMD1Q96PZ7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.14■□□□□ 0.66
CSMD1Q96PZ7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
CSMD1Q96PZ7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSMD1Q96PZ7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSMD1Q96PZ7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 AC073210.2-201ENST00000430369 194 ntBASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD1Q96PZ7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CSMD1Q96PZ7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD1Q96PZ7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSMD1Q96PZ7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms