Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 ATP5G2P3-201ENST00000429083 425 ntBASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 AC022616.5-201ENST00000518796 181 ntBASIC20.46■□□□□ 0.87
PTCHD4Q6ZW05 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 AC131274.2-201ENST00000580697 1507 ntBASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 AC007375.3-201ENST00000600936 2314 ntBASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 ALDH1A3-203ENST00000557963 1670 ntBASIC20.45■□□□□ 0.86
PTCHD4Q6ZW05 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 PVT1_1.1-201ENST00000615125 194 ntBASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTCHD4Q6ZW05 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 BHLHE23-202ENST00000612929 1109 ntBASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTCHD4Q6ZW05 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.42■□□□□ 0.86
PTCHD4Q6ZW05 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCHD4Q6ZW05 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCHD4Q6ZW05 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.42■□□□□ 0.86
PTCHD4Q6ZW05 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCHD4Q6ZW05 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCHD4Q6ZW05 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTCHD4Q6ZW05 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 AC120024.1-201ENST00000562672 995 ntBASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTCHD4Q6ZW05 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCHD4Q6ZW05 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCHD4Q6ZW05 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTCHD4Q6ZW05 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCHD4Q6ZW05 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTCHD4Q6ZW05 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PTCHD4Q6ZW05 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.39■□□□□ 0.86
PTCHD4Q6ZW05 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PTCHD4Q6ZW05 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 TSPY13P-201ENST00000338964 914 ntBASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCHD4Q6ZW05 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms