Protein–RNA interactions for Protein: Q9Y5E8

PCDHB15, Protocadherin beta-15, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB15Q9Y5E8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 AC092028.1-203ENST00000608262 953 ntBASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 AC079834.2-201ENST00000609776 1949 ntBASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 AL117328.2-201ENST00000624617 1940 ntBASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 EP400NL-214ENST00000641289 2402 ntBASIC28.19■■■□□ 2.1
PCDHB15Q9Y5E8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.18■■■□□ 2.1
PCDHB15Q9Y5E8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 AL451085.2-201ENST00000605085 799 ntBASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHB15Q9Y5E8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PCDHB15Q9Y5E8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PCDHB15Q9Y5E8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHB15Q9Y5E8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHB15Q9Y5E8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHB15Q9Y5E8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
PCDHB15Q9Y5E8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 AC009299.2-201ENST00000482477 511 ntBASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHB15Q9Y5E8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHB15Q9Y5E8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB15Q9Y5E8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB15Q9Y5E8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB15Q9Y5E8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.13■■■□□ 2.09
PCDHB15Q9Y5E8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB15Q9Y5E8 AC144652.1-201ENST00000609974 1624 ntBASIC28.13■■■□□ 2.09
PCDHB15Q9Y5E8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB15Q9Y5E8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHB15Q9Y5E8 Z92544.1-202ENST00000571933 1220 ntBASIC28.12■■■□□ 2.09
PCDHB15Q9Y5E8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHB15Q9Y5E8 AC005703.6-201ENST00000623265 1329 ntBASIC28.12■■■□□ 2.09
PCDHB15Q9Y5E8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 AC239859.2-201ENST00000444165 318 ntBASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 MIR4787-201ENST00000607364 84 ntBASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
PCDHB15Q9Y5E8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB15Q9Y5E8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.09■■■□□ 2.09
PCDHB15Q9Y5E8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms