Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.25■□□□□ 0.67
TREM2Q9NZC2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 ALDH1A3-203ENST00000557963 1670 ntBASIC19.24■□□□□ 0.67
TREM2Q9NZC2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 AC096631.2-201ENST00000436136 790 ntBASIC19.24■□□□□ 0.67
TREM2Q9NZC2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREM2Q9NZC2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
TREM2Q9NZC2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.23■□□□□ 0.67
TREM2Q9NZC2 MIR638-201ENST00000385237 100 ntBASIC19.23■□□□□ 0.67
TREM2Q9NZC2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.23■□□□□ 0.67
TREM2Q9NZC2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TREM2Q9NZC2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.23■□□□□ 0.67
TREM2Q9NZC2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TREM2Q9NZC2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TREM2Q9NZC2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TREM2Q9NZC2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TREM2Q9NZC2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.22■□□□□ 0.67
TREM2Q9NZC2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TREM2Q9NZC2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TREM2Q9NZC2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.22■□□□□ 0.67
TREM2Q9NZC2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 AC110285.6-201ENST00000617652 491 ntBASIC19.21■□□□□ 0.67
TREM2Q9NZC2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TREM2Q9NZC2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TREM2Q9NZC2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TREM2Q9NZC2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.18■□□□□ 0.66
TREM2Q9NZC2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TREM2Q9NZC2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 AL024507.2-201ENST00000606070 2574 ntBASIC19.17■□□□□ 0.66
TREM2Q9NZC2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREM2Q9NZC2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms