Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC144652.1-201ENST00000609974 1624 ntBASIC23.25■■□□□ 1.31
HAPLN3Q96S86 AC092068.2-201ENST00000590491 1708 ntBASIC23.25■■□□□ 1.31
HAPLN3Q96S86 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HAPLN3Q96S86 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
HAPLN3Q96S86 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HAPLN3Q96S86 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.24■■□□□ 1.31
HAPLN3Q96S86 AC079630.1-202ENST00000618127 1840 ntBASIC23.24■■□□□ 1.31
HAPLN3Q96S86 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.24■■□□□ 1.31
HAPLN3Q96S86 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.23■■□□□ 1.31
HAPLN3Q96S86 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HAPLN3Q96S86 SRD5A1P1-201ENST00000442297 786 ntBASIC23.22■■□□□ 1.31
HAPLN3Q96S86 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.22■■□□□ 1.31
HAPLN3Q96S86 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
HAPLN3Q96S86 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
HAPLN3Q96S86 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HAPLN3Q96S86 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HAPLN3Q96S86 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.21■■□□□ 1.31
HAPLN3Q96S86 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.21■■□□□ 1.31
HAPLN3Q96S86 AC241377.3-202ENST00000626088 1088 ntBASIC23.21■■□□□ 1.31
HAPLN3Q96S86 AC241585.3-202ENST00000628937 1088 ntBASIC23.21■■□□□ 1.31
HAPLN3Q96S86 AC245100.8-202ENST00000629247 1058 ntBASIC23.21■■□□□ 1.31
HAPLN3Q96S86 AC008406.3-201ENST00000620001 1374 ntBASIC23.21■■□□□ 1.31
HAPLN3Q96S86 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HAPLN3Q96S86 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
HAPLN3Q96S86 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.21■■□□□ 1.31
HAPLN3Q96S86 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HAPLN3Q96S86 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.21■■□□□ 1.31
HAPLN3Q96S86 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HAPLN3Q96S86 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
HAPLN3Q96S86 AL136116.3-201ENST00000402907 1138 ntBASIC23.19■■□□□ 1.3
HAPLN3Q96S86 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.19■■□□□ 1.3
HAPLN3Q96S86 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.19■■□□□ 1.3
HAPLN3Q96S86 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HAPLN3Q96S86 CLDN5-201ENST00000403084 2357 ntBASIC23.19■■□□□ 1.3
HAPLN3Q96S86 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HAPLN3Q96S86 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HAPLN3Q96S86 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.18■■□□□ 1.3
HAPLN3Q96S86 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
HAPLN3Q96S86 LINC01529-204ENST00000636474 1715 ntBASIC23.18■■□□□ 1.3
HAPLN3Q96S86 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HAPLN3Q96S86 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 DUX4L4-201ENST00000566884 1269 ntBASIC23.17■■□□□ 1.3
HAPLN3Q96S86 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
HAPLN3Q96S86 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 AC092171.4-201ENST00000609130 632 ntBASIC23.16■■□□□ 1.3
HAPLN3Q96S86 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HAPLN3Q96S86 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 AC099791.2-201ENST00000605725 427 ntBASIC23.15■■□□□ 1.3
HAPLN3Q96S86 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HAPLN3Q96S86 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
HAPLN3Q96S86 AC079834.2-201ENST00000609776 1949 ntBASIC23.14■■□□□ 1.3
HAPLN3Q96S86 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.14■■□□□ 1.3
HAPLN3Q96S86 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HAPLN3Q96S86 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.14■■□□□ 1.29
HAPLN3Q96S86 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HAPLN3Q96S86 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms