Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 AC009831.1-201ENST00000580420 1582 ntBASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 AC087393.1-201ENST00000582896 145 ntBASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 MIR7108-201ENST00000614319 87 ntBASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 GPX1-201ENST00000419349 1106 ntBASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms