Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE1Q8IWY4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.04■■□□□ 1.12
SCUBE1Q8IWY4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SCUBE1Q8IWY4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SCUBE1Q8IWY4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE1Q8IWY4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 THA1P-201ENST00000590384 1145 ntBASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 AL451085.2-201ENST00000605085 799 ntBASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SCUBE1Q8IWY4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SCUBE1Q8IWY4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SCUBE1Q8IWY4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 AC090877.2-201ENST00000558441 1738 ntBASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.01■■□□□ 1.11
SCUBE1Q8IWY4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE1Q8IWY4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SCUBE1Q8IWY4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE1Q8IWY4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.99■■□□□ 1.11
SCUBE1Q8IWY4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.99■■□□□ 1.11
SCUBE1Q8IWY4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE1Q8IWY4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE1Q8IWY4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 MIR4281-201ENST00000580852 62 ntBASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SCUBE1Q8IWY4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.96■■□□□ 1.11
SCUBE1Q8IWY4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms