Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 AC099791.1-201ENST00000416440 715 ntBASIC24.48■■□□□ 1.51
TSPAN1O60635 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TSPAN1O60635 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TSPAN1O60635 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
TSPAN1O60635 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN1O60635 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TSPAN1O60635 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN1O60635 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN1O60635 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
TSPAN1O60635 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN1O60635 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.47■■□□□ 1.51
TSPAN1O60635 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN1O60635 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN1O60635 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.47■■□□□ 1.51
TSPAN1O60635 AL499627.2-201ENST00000606283 725 ntBASIC24.47■■□□□ 1.51
TSPAN1O60635 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSPAN1O60635 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN1O60635 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.46■■□□□ 1.51
TSPAN1O60635 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN1O60635 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN1O60635 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN1O60635 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN1O60635 BX842568.3-201ENST00000418104 571 ntBASIC24.46■■□□□ 1.51
TSPAN1O60635 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.46■■□□□ 1.51
TSPAN1O60635 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.46■■□□□ 1.51
TSPAN1O60635 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.46■■□□□ 1.51
TSPAN1O60635 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.46■■□□□ 1.51
TSPAN1O60635 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN1O60635 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TSPAN1O60635 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
TSPAN1O60635 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
TSPAN1O60635 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TSPAN1O60635 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TSPAN1O60635 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.45■■□□□ 1.5
TSPAN1O60635 LINC01529-204ENST00000636474 1715 ntBASIC24.45■■□□□ 1.5
TSPAN1O60635 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN1O60635 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.45■■□□□ 1.5
TSPAN1O60635 AC233992.3-201ENST00000607491 485 ntBASIC24.45■■□□□ 1.5
TSPAN1O60635 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN1O60635 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.45■■□□□ 1.5
TSPAN1O60635 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TSPAN1O60635 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.45■■□□□ 1.5
TSPAN1O60635 AC133637.1-201ENST00000624115 1537 ntBASIC24.45■■□□□ 1.5
TSPAN1O60635 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.45■■□□□ 1.5
TSPAN1O60635 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
TSPAN1O60635 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.44■■□□□ 1.5
TSPAN1O60635 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.44■■□□□ 1.5
TSPAN1O60635 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TSPAN1O60635 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.44■■□□□ 1.5
TSPAN1O60635 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TSPAN1O60635 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TSPAN1O60635 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TSPAN1O60635 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.44■■□□□ 1.5
TSPAN1O60635 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.44■■□□□ 1.5
TSPAN1O60635 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.44■■□□□ 1.5
TSPAN1O60635 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN1O60635 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.43■■□□□ 1.5
TSPAN1O60635 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN1O60635 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TSPAN1O60635 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.43■■□□□ 1.5
TSPAN1O60635 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN1O60635 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.43■■□□□ 1.5
TSPAN1O60635 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN1O60635 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN1O60635 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TSPAN1O60635 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN1O60635 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN1O60635 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.42■■□□□ 1.5
TSPAN1O60635 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.42■■□□□ 1.5
TSPAN1O60635 SLC47A1P1-202ENST00000449666 945 ntBASIC24.42■■□□□ 1.5
TSPAN1O60635 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN1O60635 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.42■■□□□ 1.5
TSPAN1O60635 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.42■■□□□ 1.5
TSPAN1O60635 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN1O60635 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.42■■□□□ 1.5
TSPAN1O60635 AC079630.1-202ENST00000618127 1840 ntBASIC24.42■■□□□ 1.5
TSPAN1O60635 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSPAN1O60635 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.41■■□□□ 1.5
TSPAN1O60635 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN1O60635 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN1O60635 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN1O60635 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN1O60635 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN1O60635 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.41■■□□□ 1.5
TSPAN1O60635 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN1O60635 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
TSPAN1O60635 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN1O60635 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
TSPAN1O60635 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.41■■□□□ 1.5
TSPAN1O60635 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN1O60635 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.4■■□□□ 1.5
TSPAN1O60635 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN1O60635 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.4■■□□□ 1.5
TSPAN1O60635 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.4■■□□□ 1.5
TSPAN1O60635 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN1O60635 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.4■■□□□ 1.5
TSPAN1O60635 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN1O60635 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN1O60635 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN1O60635 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms