Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.24■■□□□ 1.63
DDX39AO00148 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX39AO00148 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX39AO00148 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DDX39AO00148 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX39AO00148 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.24■■□□□ 1.63
DDX39AO00148 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX39AO00148 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX39AO00148 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
DDX39AO00148 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.23■■□□□ 1.63
DDX39AO00148 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX39AO00148 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX39AO00148 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX39AO00148 AF213884.3-201ENST00000563833 479 ntBASIC25.23■■□□□ 1.63
DDX39AO00148 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.23■■□□□ 1.63
DDX39AO00148 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX39AO00148 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
DDX39AO00148 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
DDX39AO00148 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 AC079630.1-202ENST00000618127 1840 ntBASIC25.22■■□□□ 1.63
DDX39AO00148 EDA-201ENST00000338901 1233 ntBASIC25.22■■□□□ 1.63
DDX39AO00148 SUDS3P1-201ENST00000505831 966 ntBASIC25.22■■□□□ 1.63
DDX39AO00148 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 AC011298.3-201ENST00000615796 283 ntBASIC25.22■■□□□ 1.63
DDX39AO00148 AL355001.2-201ENST00000620617 1191 ntBASIC25.22■■□□□ 1.63
DDX39AO00148 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.22■■□□□ 1.63
DDX39AO00148 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX39AO00148 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.22■■□□□ 1.63
DDX39AO00148 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
DDX39AO00148 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX39AO00148 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX39AO00148 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX39AO00148 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX39AO00148 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.21■■□□□ 1.63
DDX39AO00148 AL138724.1-201ENST00000606771 1088 ntBASIC25.21■■□□□ 1.63
DDX39AO00148 AC144652.1-201ENST00000609974 1624 ntBASIC25.21■■□□□ 1.63
DDX39AO00148 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
DDX39AO00148 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX39AO00148 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX39AO00148 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX39AO00148 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX39AO00148 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX39AO00148 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX39AO00148 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
DDX39AO00148 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
DDX39AO00148 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
DDX39AO00148 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
DDX39AO00148 AP001330.3-201ENST00000520123 633 ntBASIC25.2■■□□□ 1.62
DDX39AO00148 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.2■■□□□ 1.62
DDX39AO00148 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX39AO00148 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX39AO00148 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.2■■□□□ 1.62
DDX39AO00148 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX39AO00148 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.19■■□□□ 1.62
DDX39AO00148 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX39AO00148 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
DDX39AO00148 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.19■■□□□ 1.62
DDX39AO00148 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.19■■□□□ 1.62
DDX39AO00148 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DDX39AO00148 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX39AO00148 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.18■■□□□ 1.62
DDX39AO00148 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX39AO00148 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
DDX39AO00148 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.18■■□□□ 1.62
DDX39AO00148 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
DDX39AO00148 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.18■■□□□ 1.62
DDX39AO00148 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.18■■□□□ 1.62
DDX39AO00148 AC136469.2-201ENST00000623944 1028 ntBASIC25.18■■□□□ 1.62
DDX39AO00148 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
DDX39AO00148 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
DDX39AO00148 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
DDX39AO00148 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX39AO00148 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX39AO00148 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX39AO00148 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX39AO00148 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DDX39AO00148 AC008764.7-201ENST00000593779 1081 ntBASIC25.17■■□□□ 1.62
DDX39AO00148 AC093323.1-202ENST00000635031 2045 ntBASIC25.17■■□□□ 1.62
DDX39AO00148 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
DDX39AO00148 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX39AO00148 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
DDX39AO00148 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.16■■□□□ 1.62
DDX39AO00148 AL136967.2-201ENST00000623968 743 ntBASIC25.16■■□□□ 1.62
DDX39AO00148 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
DDX39AO00148 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.16■■□□□ 1.62
DDX39AO00148 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.16■■□□□ 1.62
DDX39AO00148 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX39AO00148 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX39AO00148 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.15■■□□□ 1.62
DDX39AO00148 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX39AO00148 LINC01529-204ENST00000636474 1715 ntBASIC25.15■■□□□ 1.62
DDX39AO00148 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.15■■□□□ 1.62
DDX39AO00148 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
DDX39AO00148 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms