Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV23-1A0A0A0MS06 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV23-1A0A0A0MS06 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 AL356740.2-201ENST00000601559 647 ntBASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRBV23-1A0A0A0MS06 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV23-1A0A0A0MS06 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV23-1A0A0A0MS06 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 AL117332.1-201ENST00000622628 974 ntBASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV23-1A0A0A0MS06 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 MIR3621-201ENST00000580529 85 ntBASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TRBV23-1A0A0A0MS06 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV23-1A0A0A0MS06 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV23-1A0A0A0MS06 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms