Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRGV1A0A0A0MS02 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 AC092028.1-203ENST00000608262 953 ntBASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV1A0A0A0MS02 AC005703.6-201ENST00000623265 1329 ntBASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 TSPY9P-201ENST00000440215 945 ntBASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 TSPY11P-201ENST00000442607 1045 ntBASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 AC092068.2-201ENST00000590491 1708 ntBASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRGV1A0A0A0MS02 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 MIR6722-201ENST00000617286 78 ntBASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRGV1A0A0A0MS02 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV1A0A0A0MS02 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 C9orf163-202ENST00000624034 2573 ntBASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV1A0A0A0MS02 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms