Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKB-CPT1BH3BT56 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKB-CPT1BH3BT56 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKB-CPT1BH3BT56 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKB-CPT1BH3BT56 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHKB-CPT1BH3BT56 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKB-CPT1BH3BT56 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16■□□□□ 0.15
CHKB-CPT1BH3BT56 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKB-CPT1BH3BT56 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHKB-CPT1BH3BT56 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKB-CPT1BH3BT56 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHKB-CPT1BH3BT56 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHKB-CPT1BH3BT56 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHKB-CPT1BH3BT56 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHKB-CPT1BH3BT56 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHKB-CPT1BH3BT56 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHKB-CPT1BH3BT56 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHKB-CPT1BH3BT56 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHKB-CPT1BH3BT56 AL356512.1-201ENST00000607453 1739 ntBASIC15.94■□□□□ 0.14
CHKB-CPT1BH3BT56 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CHKB-CPT1BH3BT56 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHKB-CPT1BH3BT56 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHKB-CPT1BH3BT56 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.91■□□□□ 0.14
CHKB-CPT1BH3BT56 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHKB-CPT1BH3BT56 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.91■□□□□ 0.14
CHKB-CPT1BH3BT56 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHKB-CPT1BH3BT56 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHKB-CPT1BH3BT56 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKB-CPT1BH3BT56 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CHKB-CPT1BH3BT56 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHKB-CPT1BH3BT56 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKB-CPT1BH3BT56 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKB-CPT1BH3BT56 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKB-CPT1BH3BT56 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHKB-CPT1BH3BT56 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHKB-CPT1BH3BT56 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHKB-CPT1BH3BT56 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHKB-CPT1BH3BT56 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.86■□□□□ 0.13
CHKB-CPT1BH3BT56 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CHKB-CPT1BH3BT56 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHKB-CPT1BH3BT56 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHKB-CPT1BH3BT56 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHKB-CPT1BH3BT56 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CHKB-CPT1BH3BT56 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CHKB-CPT1BH3BT56 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
CHKB-CPT1BH3BT56 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHKB-CPT1BH3BT56 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHKB-CPT1BH3BT56 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHKB-CPT1BH3BT56 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHKB-CPT1BH3BT56 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHKB-CPT1BH3BT56 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHKB-CPT1BH3BT56 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHKB-CPT1BH3BT56 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHKB-CPT1BH3BT56 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC15.77■□□□□ 0.12
CHKB-CPT1BH3BT56 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHKB-CPT1BH3BT56 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC15.77■□□□□ 0.11
CHKB-CPT1BH3BT56 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHKB-CPT1BH3BT56 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
CHKB-CPT1BH3BT56 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHKB-CPT1BH3BT56 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHKB-CPT1BH3BT56 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHKB-CPT1BH3BT56 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHKB-CPT1BH3BT56 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHKB-CPT1BH3BT56 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHKB-CPT1BH3BT56 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.75■□□□□ 0.11
CHKB-CPT1BH3BT56 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CHKB-CPT1BH3BT56 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHKB-CPT1BH3BT56 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHKB-CPT1BH3BT56 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHKB-CPT1BH3BT56 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CHKB-CPT1BH3BT56 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHKB-CPT1BH3BT56 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHKB-CPT1BH3BT56 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CHKB-CPT1BH3BT56 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHKB-CPT1BH3BT56 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHKB-CPT1BH3BT56 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CHKB-CPT1BH3BT56 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.72■□□□□ 0.11
CHKB-CPT1BH3BT56 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHKB-CPT1BH3BT56 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHKB-CPT1BH3BT56 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHKB-CPT1BH3BT56 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHKB-CPT1BH3BT56 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHKB-CPT1BH3BT56 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHKB-CPT1BH3BT56 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHKB-CPT1BH3BT56 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHKB-CPT1BH3BT56 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHKB-CPT1BH3BT56 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHKB-CPT1BH3BT56 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHKB-CPT1BH3BT56 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHKB-CPT1BH3BT56 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHKB-CPT1BH3BT56 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHKB-CPT1BH3BT56 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CHKB-CPT1BH3BT56 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHKB-CPT1BH3BT56 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHKB-CPT1BH3BT56 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHKB-CPT1BH3BT56 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHKB-CPT1BH3BT56 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CHKB-CPT1BH3BT56 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHKB-CPT1BH3BT56 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHKB-CPT1BH3BT56 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms