Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SMOQ99835 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.71■■□□□ 1.39
SMOQ99835 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.71■■□□□ 1.39
SMOQ99835 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SMOQ99835 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SMOQ99835 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
SMOQ99835 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.7■■□□□ 1.38
SMOQ99835 SERBP1P1-201ENST00000396021 1160 ntBASIC23.7■■□□□ 1.38
SMOQ99835 AL136162.1-201ENST00000607711 1078 ntBASIC23.7■■□□□ 1.38
SMOQ99835 AC092171.4-201ENST00000609130 632 ntBASIC23.7■■□□□ 1.38
SMOQ99835 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SMOQ99835 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMOQ99835 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
SMOQ99835 SYT6-210ENST00000641643 1587 ntBASIC23.69■■□□□ 1.38
SMOQ99835 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.69■■□□□ 1.38
SMOQ99835 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.69■■□□□ 1.38
SMOQ99835 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMOQ99835 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMOQ99835 MIR638-201ENST00000385237 100 ntBASIC23.69■■□□□ 1.38
SMOQ99835 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMOQ99835 DUX4L19-201ENST00000557448 1267 ntBASIC23.69■■□□□ 1.38
SMOQ99835 AC009086.3-201ENST00000623486 1008 ntBASIC23.69■■□□□ 1.38
SMOQ99835 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SMOQ99835 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SMOQ99835 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMOQ99835 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMOQ99835 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.68■■□□□ 1.38
SMOQ99835 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMOQ99835 PBX2P1-201ENST00000493219 1291 ntBASIC23.68■■□□□ 1.38
SMOQ99835 AC024257.2-201ENST00000549699 147 ntBASIC23.68■■□□□ 1.38
SMOQ99835 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.68■■□□□ 1.38
SMOQ99835 AC106739.1-201ENST00000617035 715 ntBASIC23.68■■□□□ 1.38
SMOQ99835 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 AC144652.1-201ENST00000609974 1624 ntBASIC23.67■■□□□ 1.38
SMOQ99835 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SMOQ99835 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.67■■□□□ 1.38
SMOQ99835 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SMOQ99835 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.67■■□□□ 1.38
SMOQ99835 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.67■■□□□ 1.38
SMOQ99835 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.67■■□□□ 1.38
SMOQ99835 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.67■■□□□ 1.38
SMOQ99835 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.67■■□□□ 1.38
SMOQ99835 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SMOQ99835 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.67■■□□□ 1.38
SMOQ99835 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.67■■□□□ 1.38
SMOQ99835 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMOQ99835 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMOQ99835 AC079630.1-202ENST00000618127 1840 ntBASIC23.66■■□□□ 1.38
SMOQ99835 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMOQ99835 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.66■■□□□ 1.38
SMOQ99835 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.66■■□□□ 1.38
SMOQ99835 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SMOQ99835 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.66■■□□□ 1.38
SMOQ99835 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMOQ99835 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMOQ99835 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMOQ99835 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMOQ99835 AC135279.3-201ENST00000610945 1311 ntBASIC23.65■■□□□ 1.38
SMOQ99835 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMOQ99835 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.65■■□□□ 1.38
SMOQ99835 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.65■■□□□ 1.38
SMOQ99835 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMOQ99835 FP325331.1-202ENST00000623531 1380 ntBASIC23.65■■□□□ 1.38
SMOQ99835 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMOQ99835 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SMOQ99835 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.64■■□□□ 1.38
SMOQ99835 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
SMOQ99835 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.64■■□□□ 1.37
SMOQ99835 MIR3181-201ENST00000578512 73 ntBASIC23.64■■□□□ 1.37
SMOQ99835 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
SMOQ99835 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMOQ99835 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMOQ99835 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SMOQ99835 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SMOQ99835 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.63■■□□□ 1.37
SMOQ99835 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMOQ99835 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SMOQ99835 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms