Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ALMS1Q8TCU4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ALMS1Q8TCU4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ALMS1Q8TCU4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.45■□□□□ 0.06
ALMS1Q8TCU4 AC004854.2-201ENST00000608450 1441 ntBASIC15.45■□□□□ 0.06
ALMS1Q8TCU4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ALMS1Q8TCU4 OR2I1P-207ENST00000453522 948 ntBASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 BID-214ENST00000617586 542 ntTSL 5 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 AC010501.1-201ENST00000606270 1962 ntBASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.44■□□□□ 0.06
ALMS1Q8TCU4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 AC133637.1-201ENST00000624115 1537 ntBASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 NCF1B-203ENST00000435988 1254 ntBASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 AL138781.1-201ENST00000566567 1274 ntBASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 AC010525.1-201ENST00000585559 441 ntBASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
ALMS1Q8TCU4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 TMEM191A-211ENST00000637163 1067 ntBASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 MIR6089-201ENST00000616698 64 ntBASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 AL050303.2-201ENST00000619798 666 ntBASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC15.42■□□□□ 0.06
ALMS1Q8TCU4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
ALMS1Q8TCU4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 AL022069.1-201ENST00000568025 1636 ntBASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ALMS1Q8TCU4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
ALMS1Q8TCU4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms