Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TTC9CQ8N5M4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 AC010997.5-201ENST00000609182 354 ntBASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TTC9CQ8N5M4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 DUSP8P3-201ENST00000399571 1760 ntBASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 AL035685.1-201ENST00000636663 812 ntBASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TTC9CQ8N5M4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TTC9CQ8N5M4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TTC9CQ8N5M4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 TSPY9P-201ENST00000440215 945 ntBASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 TSPY11P-201ENST00000442607 1045 ntBASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC9CQ8N5M4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 AC079630.1-202ENST00000618127 1840 ntBASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC9CQ8N5M4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC9CQ8N5M4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms