Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VRK2Q86Y07 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.8■□□□□ 0.92
VRK2Q86Y07 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 C1orf229-201ENST00000623686 2258 ntBASIC20.79■□□□□ 0.92
VRK2Q86Y07 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
VRK2Q86Y07 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
VRK2Q86Y07 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC021242.3-201ENST00000607598 1377 ntBASIC20.75■□□□□ 0.91
VRK2Q86Y07 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.75■□□□□ 0.91
VRK2Q86Y07 BX664725.1-201ENST00000438252 379 ntBASIC20.75■□□□□ 0.91
VRK2Q86Y07 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.75■□□□□ 0.91
VRK2Q86Y07 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRK2Q86Y07 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VRK2Q86Y07 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VRK2Q86Y07 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 RARRES2P1-201ENST00000474487 481 ntBASIC20.73■□□□□ 0.91
VRK2Q86Y07 AC233723.2-201ENST00000623798 2106 ntBASIC20.73■□□□□ 0.91
VRK2Q86Y07 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VRK2Q86Y07 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VRK2Q86Y07 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms