Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC34.62■■■■□ 3.13
CDC42BPAQ5VT25 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CDC42BPAQ5VT25 ME3-201ENST00000323418 1068 ntTSL 5 BASIC34.62■■■■□ 3.13
CDC42BPAQ5VT25 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CDC42BPAQ5VT25 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC34.61■■■■□ 3.13
CDC42BPAQ5VT25 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CDC42BPAQ5VT25 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC34.6■■■■□ 3.13
CDC42BPAQ5VT25 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
CDC42BPAQ5VT25 OR2I1P-207ENST00000453522 948 ntBASIC34.6■■■■□ 3.13
CDC42BPAQ5VT25 CCDC92B-201ENST00000575506 885 ntBASIC34.6■■■■□ 3.13
CDC42BPAQ5VT25 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC34.59■■■■□ 3.13
CDC42BPAQ5VT25 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CDC42BPAQ5VT25 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
CDC42BPAQ5VT25 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CDC42BPAQ5VT25 AL499627.2-201ENST00000606283 725 ntBASIC34.59■■■■□ 3.13
CDC42BPAQ5VT25 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 AL137784.2-201ENST00000607332 1000 ntBASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 AL354811.1-201ENST00000610286 706 ntBASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 AC133637.1-201ENST00000624115 1537 ntBASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 KRT18P14-201ENST00000534205 1250 ntBASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPAQ5VT25 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.13
CDC42BPAQ5VT25 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
CDC42BPAQ5VT25 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CDC42BPAQ5VT25 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CDC42BPAQ5VT25 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC34.57■■■■□ 3.12
CDC42BPAQ5VT25 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
CDC42BPAQ5VT25 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
CDC42BPAQ5VT25 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CDC42BPAQ5VT25 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC34.57■■■■□ 3.12
CDC42BPAQ5VT25 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
CDC42BPAQ5VT25 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC34.55■■■■□ 3.12
CDC42BPAQ5VT25 TERF1P2-201ENST00000583350 1212 ntBASIC34.55■■■■□ 3.12
CDC42BPAQ5VT25 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPAQ5VT25 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPAQ5VT25 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC34.55■■■■□ 3.12
CDC42BPAQ5VT25 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPAQ5VT25 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
CDC42BPAQ5VT25 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDC42BPAQ5VT25 NME4-202ENST00000382940 766 ntTSL 3 BASIC34.54■■■■□ 3.12
CDC42BPAQ5VT25 NME4-211ENST00000620944 1193 ntTSL 2 BASIC34.54■■■■□ 3.12
CDC42BPAQ5VT25 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDC42BPAQ5VT25 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC34.54■■■■□ 3.12
CDC42BPAQ5VT25 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDC42BPAQ5VT25 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPAQ5VT25 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC34.52■■■■□ 3.12
CDC42BPAQ5VT25 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CDC42BPAQ5VT25 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CDC42BPAQ5VT25 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CDC42BPAQ5VT25 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CDC42BPAQ5VT25 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC34.51■■■■□ 3.12
CDC42BPAQ5VT25 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
CDC42BPAQ5VT25 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CDC42BPAQ5VT25 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms