Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.42■□□□□ 0.38
TM4SF20Q53R12 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM4SF20Q53R12 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM4SF20Q53R12 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.42■□□□□ 0.38
TM4SF20Q53R12 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 PKD1P6-201ENST00000343738 4769 ntBASIC17.41■□□□□ 0.38
TM4SF20Q53R12 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 GUSBP5-201ENST00000418136 578 ntBASIC17.41■□□□□ 0.38
TM4SF20Q53R12 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM4SF20Q53R12 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 UNC93B8-201ENST00000511903 705 ntBASIC17.4■□□□□ 0.38
TM4SF20Q53R12 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 AC010997.5-201ENST00000609182 354 ntBASIC17.4■□□□□ 0.38
TM4SF20Q53R12 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.4■□□□□ 0.38
TM4SF20Q53R12 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TM4SF20Q53R12 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 MIR6722-201ENST00000617286 78 ntBASIC17.39■□□□□ 0.37
TM4SF20Q53R12 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TM4SF20Q53R12 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 CLDN5-201ENST00000403084 2357 ntBASIC17.38■□□□□ 0.37
TM4SF20Q53R12 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TM4SF20Q53R12 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM4SF20Q53R12 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM4SF20Q53R12 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms