Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-5A0A0J9YX44 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.58■□□□□ 0.73
TRBV5-5A0A0J9YX44 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-5A0A0J9YX44 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-5A0A0J9YX44 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-5A0A0J9YX44 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TRBV5-5A0A0J9YX44 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 AC022616.5-201ENST00000518796 181 ntBASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 AC129492.7-201ENST00000622992 756 ntBASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-5A0A0J9YX44 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 AC019171.1-201ENST00000601251 1056 ntBASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-5A0A0J9YX44 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-5A0A0J9YX44 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV5-5A0A0J9YX44 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRBV5-5A0A0J9YX44 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.54■□□□□ 0.72
TRBV5-5A0A0J9YX44 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.54■□□□□ 0.72
TRBV5-5A0A0J9YX44 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-5A0A0J9YX44 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRBV5-5A0A0J9YX44 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-5A0A0J9YX44 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 U85056.1-201ENST00000616429 682 ntBASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-5A0A0J9YX44 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.52■□□□□ 0.71
TRBV5-5A0A0J9YX44 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC139530.1-201ENST00000575312 1977 ntBASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms