Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 CLDN5-201ENST00000403084 2357 ntBASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.39■□□□□ 0.53
SAA2-SAA4A0A096LPE2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA2-SAA4A0A096LPE2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AC079630.1-202ENST00000618127 1840 ntBASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SAA2-SAA4A0A096LPE2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SAA2-SAA4A0A096LPE2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 KRT125P-201ENST00000546827 989 ntBASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA2-SAA4A0A096LPE2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 Z92544.1-202ENST00000571933 1220 ntBASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 MIR6722-201ENST00000617286 78 ntBASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.34■□□□□ 0.53
SAA2-SAA4A0A096LPE2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.33■□□□□ 0.53
SAA2-SAA4A0A096LPE2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.33■□□□□ 0.53
SAA2-SAA4A0A096LPE2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAA2-SAA4A0A096LPE2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAA2-SAA4A0A096LPE2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA2-SAA4A0A096LPE2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SAA2-SAA4A0A096LPE2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms