Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PARPBPQ9NWS1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PARPBPQ9NWS1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PARPBPQ9NWS1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PARPBPQ9NWS1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PARPBPQ9NWS1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PARPBPQ9NWS1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.11■□□□□ 0.81
PARPBPQ9NWS1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PARPBPQ9NWS1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PARPBPQ9NWS1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PARPBPQ9NWS1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.08■□□□□ 0.81
PARPBPQ9NWS1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PARPBPQ9NWS1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.08■□□□□ 0.81
PARPBPQ9NWS1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.08■□□□□ 0.81
PARPBPQ9NWS1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.08■□□□□ 0.81
PARPBPQ9NWS1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.08■□□□□ 0.81
PARPBPQ9NWS1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PARPBPQ9NWS1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.08■□□□□ 0.8
PARPBPQ9NWS1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PARPBPQ9NWS1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
PARPBPQ9NWS1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PARPBPQ9NWS1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PARPBPQ9NWS1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PARPBPQ9NWS1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PARPBPQ9NWS1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms