Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SH3TC1Q8TE82 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SH3TC1Q8TE82 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.38■■■□□ 2.13
SH3TC1Q8TE82 AC092666.2-201ENST00000613287 246 ntBASIC28.38■■■□□ 2.13
SH3TC1Q8TE82 MIR6821-201ENST00000617625 74 ntBASIC28.38■■■□□ 2.13
SH3TC1Q8TE82 AP003733.4-201ENST00000623785 1697 ntBASIC28.38■■■□□ 2.13
SH3TC1Q8TE82 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.37■■■□□ 2.13
SH3TC1Q8TE82 BX842568.3-201ENST00000418104 571 ntBASIC28.37■■■□□ 2.13
SH3TC1Q8TE82 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SH3TC1Q8TE82 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SH3TC1Q8TE82 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.37■■■□□ 2.13
SH3TC1Q8TE82 AC233992.3-201ENST00000607491 485 ntBASIC28.37■■■□□ 2.13
SH3TC1Q8TE82 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SH3TC1Q8TE82 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC1Q8TE82 AC142381.3-201ENST00000568208 1670 ntBASIC28.35■■■□□ 2.13
SH3TC1Q8TE82 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SH3TC1Q8TE82 AC097381.1-201ENST00000429019 1296 ntBASIC28.35■■■□□ 2.13
SH3TC1Q8TE82 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
SH3TC1Q8TE82 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 AC135731.1-201ENST00000569415 2548 ntBASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 IRS3P-201ENST00000223076 1006 ntBASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 pRNA.6-201ENST00000610482 90 ntBASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 pRNA.5-201ENST00000612139 90 ntBASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 pRNA.11-201ENST00000618423 90 ntBASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 pRNA.13-201ENST00000619112 90 ntBASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC1Q8TE82 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC1Q8TE82 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.32■■■□□ 2.12
SH3TC1Q8TE82 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.32■■■□□ 2.12
SH3TC1Q8TE82 AC141586.4-201ENST00000624558 1573 ntBASIC28.32■■■□□ 2.12
SH3TC1Q8TE82 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SH3TC1Q8TE82 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.31■■■□□ 2.12
SH3TC1Q8TE82 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.31■■■□□ 2.12
SH3TC1Q8TE82 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.31■■■□□ 2.12
SH3TC1Q8TE82 AC104564.3-201ENST00000582367 638 ntBASIC28.31■■■□□ 2.12
SH3TC1Q8TE82 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.31■■■□□ 2.12
SH3TC1Q8TE82 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SH3TC1Q8TE82 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 AC087623.3-201ENST00000607047 1098 ntBASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.3■■■□□ 2.12
SH3TC1Q8TE82 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 AC138932.3-201ENST00000567634 1902 ntBASIC28.29■■■□□ 2.12
SH3TC1Q8TE82 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.28■■■□□ 2.12
SH3TC1Q8TE82 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.27■■■□□ 2.12
SH3TC1Q8TE82 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.26■■■□□ 2.12
SH3TC1Q8TE82 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms