Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.27■□□□□ 0.84
FNDC9Q8TBE3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FNDC9Q8TBE3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.27■□□□□ 0.83
FNDC9Q8TBE3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FNDC9Q8TBE3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 AC141586.4-201ENST00000624558 1573 ntBASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.26■□□□□ 0.83
FNDC9Q8TBE3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 AC096631.2-201ENST00000436136 790 ntBASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FNDC9Q8TBE3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FNDC9Q8TBE3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FNDC9Q8TBE3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 AC004812.2-201ENST00000611079 2094 ntBASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 AL139246.5-201ENST00000606645 996 ntBASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 AC110285.6-201ENST00000617652 491 ntBASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FNDC9Q8TBE3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.21■□□□□ 0.83
FNDC9Q8TBE3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 C17orf82-201ENST00000623772 1530 ntBASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC9Q8TBE3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms