Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 LINC01124-201ENST00000409786 2117 ntBASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NIPAL1Q6NVV3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 AL024507.2-201ENST00000606070 2574 ntBASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 ALDH1A3-203ENST00000557963 1670 ntBASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.65■■□□□ 1.06
NIPAL1Q6NVV3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NIPAL1Q6NVV3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NIPAL1Q6NVV3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NIPAL1Q6NVV3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.64■■□□□ 1.05
NIPAL1Q6NVV3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NIPAL1Q6NVV3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.05
NIPAL1Q6NVV3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
NIPAL1Q6NVV3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL1Q6NVV3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NIPAL1Q6NVV3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NIPAL1Q6NVV3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NIPAL1Q6NVV3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.62■■□□□ 1.05
NIPAL1Q6NVV3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.62■■□□□ 1.05
NIPAL1Q6NVV3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NIPAL1Q6NVV3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.61■■□□□ 1.05
NIPAL1Q6NVV3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NIPAL1Q6NVV3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.61■■□□□ 1.05
NIPAL1Q6NVV3 AL356740.2-201ENST00000601559 647 ntBASIC21.61■■□□□ 1.05
NIPAL1Q6NVV3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
NIPAL1Q6NVV3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NIPAL1Q6NVV3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL1Q6NVV3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL1Q6NVV3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.58■■□□□ 1.05
NIPAL1Q6NVV3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
NIPAL1Q6NVV3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NIPAL1Q6NVV3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NIPAL1Q6NVV3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NIPAL1Q6NVV3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.57■■□□□ 1.04
NIPAL1Q6NVV3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms