Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN2P80188 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN2P80188 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LCN2P80188 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN2P80188 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCN2P80188 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.88■□□□□ 0.61
LCN2P80188 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
LCN2P80188 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.88■□□□□ 0.61
LCN2P80188 AC005837.3-201ENST00000612163 286 ntBASIC18.88■□□□□ 0.61
LCN2P80188 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.88■□□□□ 0.61
LCN2P80188 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCN2P80188 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LCN2P80188 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN2P80188 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN2P80188 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.87■□□□□ 0.61
LCN2P80188 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LCN2P80188 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.87■□□□□ 0.61
LCN2P80188 AL136162.1-201ENST00000607711 1078 ntBASIC18.87■□□□□ 0.61
LCN2P80188 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.87■□□□□ 0.61
LCN2P80188 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN2P80188 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LCN2P80188 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN2P80188 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN2P80188 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.86■□□□□ 0.61
LCN2P80188 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN2P80188 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN2P80188 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.86■□□□□ 0.61
LCN2P80188 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN2P80188 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN2P80188 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LCN2P80188 AP003733.4-201ENST00000623785 1697 ntBASIC18.85■□□□□ 0.61
LCN2P80188 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN2P80188 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN2P80188 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN2P80188 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCN2P80188 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LCN2P80188 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.85■□□□□ 0.61
LCN2P80188 MIR935-201ENST00000401179 91 ntBASIC18.85■□□□□ 0.61
LCN2P80188 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.85■□□□□ 0.61
LCN2P80188 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN2P80188 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN2P80188 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LCN2P80188 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LCN2P80188 AC106739.1-201ENST00000617035 715 ntBASIC18.85■□□□□ 0.61
LCN2P80188 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN2P80188 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN2P80188 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN2P80188 AC135279.3-201ENST00000610945 1311 ntBASIC18.84■□□□□ 0.61
LCN2P80188 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN2P80188 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCN2P80188 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LCN2P80188 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LCN2P80188 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LCN2P80188 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LCN2P80188 AL161729.1-201ENST00000604104 1402 ntBASIC18.83■□□□□ 0.61
LCN2P80188 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.83■□□□□ 0.61
LCN2P80188 AC009102.2-201ENST00000606772 1639 ntBASIC18.83■□□□□ 0.61
LCN2P80188 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCN2P80188 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.83■□□□□ 0.6
LCN2P80188 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCN2P80188 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCN2P80188 AC133561.4-201ENST00000566112 224 ntBASIC18.83■□□□□ 0.6
LCN2P80188 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCN2P80188 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.83■□□□□ 0.6
LCN2P80188 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LCN2P80188 AC142381.3-201ENST00000568208 1670 ntBASIC18.82■□□□□ 0.6
LCN2P80188 AC138932.3-201ENST00000567634 1902 ntBASIC18.82■□□□□ 0.6
LCN2P80188 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCN2P80188 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.82■□□□□ 0.6
LCN2P80188 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LCN2P80188 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.82■□□□□ 0.6
LCN2P80188 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCN2P80188 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.82■□□□□ 0.6
LCN2P80188 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCN2P80188 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LCN2P80188 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCN2P80188 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCN2P80188 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.82■□□□□ 0.6
LCN2P80188 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LCN2P80188 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.81■□□□□ 0.6
LCN2P80188 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.81■□□□□ 0.6
LCN2P80188 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 AC024257.2-201ENST00000549699 147 ntBASIC18.81■□□□□ 0.6
LCN2P80188 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.81■□□□□ 0.6
LCN2P80188 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCN2P80188 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
LCN2P80188 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms