Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
USH2AO75445 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 MIR1224-201ENST00000408193 85 ntBASIC10.27□□□□□ -0.77
USH2AO75445 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC10.27□□□□□ -0.77
USH2AO75445 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC10.27□□□□□ -0.77
USH2AO75445 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC10.27□□□□□ -0.77
USH2AO75445 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC10.27□□□□□ -0.77
USH2AO75445 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC10.27□□□□□ -0.77
USH2AO75445 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
USH2AO75445 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC10.27□□□□□ -0.77
USH2AO75445 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC10.27□□□□□ -0.77
USH2AO75445 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
USH2AO75445 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC10.27□□□□□ -0.77
USH2AO75445 PROC-203ENST00000409048 1586 ntTSL 5 BASIC10.26□□□□□ -0.77
USH2AO75445 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC10.26□□□□□ -0.77
USH2AO75445 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
USH2AO75445 GCSHP5-201ENST00000443090 522 ntBASIC10.26□□□□□ -0.77
USH2AO75445 AC087239.1-201ENST00000622671 572 ntBASIC10.26□□□□□ -0.77
USH2AO75445 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
USH2AO75445 AC091060.1-201ENST00000623524 1766 ntBASIC10.26□□□□□ -0.77
USH2AO75445 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 AC004854.2-201ENST00000608450 1441 ntBASIC10.26□□□□□ -0.77
USH2AO75445 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC10.26□□□□□ -0.77
USH2AO75445 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC10.26□□□□□ -0.77
USH2AO75445 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC10.26□□□□□ -0.77
USH2AO75445 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC10.26□□□□□ -0.77
USH2AO75445 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC10.26□□□□□ -0.77
USH2AO75445 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
USH2AO75445 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
USH2AO75445 KRT18P29-201ENST00000397031 1267 ntBASIC10.25□□□□□ -0.77
USH2AO75445 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC10.25□□□□□ -0.77
USH2AO75445 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
USH2AO75445 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
USH2AO75445 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC10.25□□□□□ -0.77
USH2AO75445 FAM201B-201ENST00000458407 597 ntBASIC10.25□□□□□ -0.77
USH2AO75445 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
USH2AO75445 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
USH2AO75445 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC10.25□□□□□ -0.77
USH2AO75445 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
USH2AO75445 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
USH2AO75445 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
USH2AO75445 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
USH2AO75445 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
USH2AO75445 TSPY6P-201ENST00000448518 926 ntBASIC10.25□□□□□ -0.77
USH2AO75445 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
USH2AO75445 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 RHEB-204ENST00000472642 900 ntTSL 3 BASIC10.24□□□□□ -0.77
USH2AO75445 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC10.24□□□□□ -0.77
USH2AO75445 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
USH2AO75445 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
USH2AO75445 DRD5P2-201ENST00000421395 2012 ntBASIC10.24□□□□□ -0.77
USH2AO75445 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC10.24□□□□□ -0.77
USH2AO75445 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 AC131274.2-201ENST00000580697 1507 ntBASIC10.24□□□□□ -0.77
USH2AO75445 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
USH2AO75445 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC10.24□□□□□ -0.77
USH2AO75445 MAZ-216ENST00000616501 991 ntTSL 5 BASIC10.24□□□□□ -0.77
USH2AO75445 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
USH2AO75445 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
USH2AO75445 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC10.24□□□□□ -0.77
USH2AO75445 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC10.24□□□□□ -0.77
USH2AO75445 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC10.24□□□□□ -0.77
USH2AO75445 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC10.24□□□□□ -0.77
USH2AO75445 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
USH2AO75445 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC10.23□□□□□ -0.77
USH2AO75445 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
USH2AO75445 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
USH2AO75445 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
USH2AO75445 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
USH2AO75445 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC10.23□□□□□ -0.77
USH2AO75445 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
USH2AO75445 VGF-203ENST00000611537 1622 ntTSL 5 BASIC10.23□□□□□ -0.77
USH2AO75445 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC10.23□□□□□ -0.77
USH2AO75445 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC10.23□□□□□ -0.77
USH2AO75445 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC10.23□□□□□ -0.77
USH2AO75445 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
USH2AO75445 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
USH2AO75445 AC083906.2-201ENST00000511578 360 ntBASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms