Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AC233723.2-201ENST00000623798 2106 ntBASIC20.39■□□□□ 0.86
PTP4A3O75365 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PTP4A3O75365 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.39■□□□□ 0.86
PTP4A3O75365 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTP4A3O75365 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
PTP4A3O75365 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTP4A3O75365 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.39■□□□□ 0.85
PTP4A3O75365 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.39■□□□□ 0.85
PTP4A3O75365 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.39■□□□□ 0.85
PTP4A3O75365 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTP4A3O75365 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PTP4A3O75365 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTP4A3O75365 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.39■□□□□ 0.85
PTP4A3O75365 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.39■□□□□ 0.85
PTP4A3O75365 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTP4A3O75365 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTP4A3O75365 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.38■□□□□ 0.85
PTP4A3O75365 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTP4A3O75365 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTP4A3O75365 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PTP4A3O75365 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.38■□□□□ 0.85
PTP4A3O75365 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.38■□□□□ 0.85
PTP4A3O75365 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.38■□□□□ 0.85
PTP4A3O75365 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.38■□□□□ 0.85
PTP4A3O75365 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTP4A3O75365 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.38■□□□□ 0.85
PTP4A3O75365 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTP4A3O75365 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
PTP4A3O75365 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A3O75365 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A3O75365 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A3O75365 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A3O75365 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A3O75365 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A3O75365 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.37■□□□□ 0.85
PTP4A3O75365 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.37■□□□□ 0.85
PTP4A3O75365 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PTP4A3O75365 MIR4508-201ENST00000584178 70 ntBASIC20.37■□□□□ 0.85
PTP4A3O75365 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PTP4A3O75365 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PTP4A3O75365 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.36■□□□□ 0.85
PTP4A3O75365 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.36■□□□□ 0.85
PTP4A3O75365 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.36■□□□□ 0.85
PTP4A3O75365 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A3O75365 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A3O75365 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A3O75365 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A3O75365 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A3O75365 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A3O75365 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A3O75365 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.35■□□□□ 0.85
PTP4A3O75365 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A3O75365 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A3O75365 AC079630.1-202ENST00000618127 1840 ntBASIC20.34■□□□□ 0.85
PTP4A3O75365 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A3O75365 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PTP4A3O75365 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.34■□□□□ 0.85
PTP4A3O75365 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A3O75365 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PTP4A3O75365 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTP4A3O75365 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A3O75365 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A3O75365 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A3O75365 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A3O75365 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A3O75365 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A3O75365 AC103834.1-201ENST00000520383 144 ntBASIC20.33■□□□□ 0.85
PTP4A3O75365 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTP4A3O75365 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
PTP4A3O75365 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A3O75365 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A3O75365 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTP4A3O75365 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A3O75365 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.32■□□□□ 0.84
PTP4A3O75365 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.32■□□□□ 0.84
PTP4A3O75365 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.32■□□□□ 0.84
PTP4A3O75365 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A3O75365 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A3O75365 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A3O75365 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTP4A3O75365 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A3O75365 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.31■□□□□ 0.84
PTP4A3O75365 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTP4A3O75365 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.31■□□□□ 0.84
PTP4A3O75365 AC012354.3-201ENST00000623734 483 ntBASIC20.31■□□□□ 0.84
PTP4A3O75365 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A3O75365 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.31■□□□□ 0.84
PTP4A3O75365 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PTP4A3O75365 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A3O75365 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.3■□□□□ 0.84
PTP4A3O75365 AL033527.3-201ENST00000566366 1196 ntBASIC20.3■□□□□ 0.84
PTP4A3O75365 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms