Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV23-1A0A0A0MS06 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 AC010997.5-201ENST00000609182 354 ntBASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV23-1A0A0A0MS06 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 C9orf163-202ENST00000624034 2573 ntBASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV23-1A0A0A0MS06 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 UNC93B8-201ENST00000511903 705 ntBASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV23-1A0A0A0MS06 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 KRT16P3-201ENST00000439127 1283 ntBASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV23-1A0A0A0MS06 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.89■□□□□ 0.62
TRBV23-1A0A0A0MS06 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.89■□□□□ 0.62
TRBV23-1A0A0A0MS06 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
TRBV23-1A0A0A0MS06 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
TRBV23-1A0A0A0MS06 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 ALDH1A3-203ENST00000557963 1670 ntBASIC18.89■□□□□ 0.61
TRBV23-1A0A0A0MS06 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV23-1A0A0A0MS06 AC005703.6-201ENST00000623265 1329 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms