Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC3BQ96PB8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.48■■□□□ 1.35
LRRC3BQ96PB8 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.48■■□□□ 1.35
LRRC3BQ96PB8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC3BQ96PB8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC3BQ96PB8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC3BQ96PB8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC3BQ96PB8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 AC009086.3-201ENST00000623486 1008 ntBASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.47■■□□□ 1.35
LRRC3BQ96PB8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 AC135731.1-201ENST00000569415 2548 ntBASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 AC104564.3-201ENST00000582367 638 ntBASIC23.46■■□□□ 1.35
LRRC3BQ96PB8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 IRS3P-201ENST00000223076 1006 ntBASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.45■■□□□ 1.34
LRRC3BQ96PB8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 AL161729.1-201ENST00000604104 1402 ntBASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 AC233992.3-201ENST00000607491 485 ntBASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 ALDH1A3-203ENST00000557963 1670 ntBASIC23.44■■□□□ 1.34
LRRC3BQ96PB8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRC3BQ96PB8 AC022211.4-201ENST00000625094 2161 ntBASIC23.42■■□□□ 1.34
LRRC3BQ96PB8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LRRC3BQ96PB8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.42■■□□□ 1.34
LRRC3BQ96PB8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.42■■□□□ 1.34
LRRC3BQ96PB8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
LRRC3BQ96PB8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.42■■□□□ 1.34
LRRC3BQ96PB8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
LRRC3BQ96PB8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LRRC3BQ96PB8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LRRC3BQ96PB8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LRRC3BQ96PB8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.41■■□□□ 1.34
LRRC3BQ96PB8 BX842568.3-201ENST00000418104 571 ntBASIC23.41■■□□□ 1.34
LRRC3BQ96PB8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
LRRC3BQ96PB8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 AL162430.1-201ENST00000480705 870 ntBASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 pRNA.6-201ENST00000610482 90 ntBASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 pRNA.5-201ENST00000612139 90 ntBASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 pRNA.11-201ENST00000618423 90 ntBASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 pRNA.13-201ENST00000619112 90 ntBASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LRRC3BQ96PB8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
LRRC3BQ96PB8 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.39■■□□□ 1.33
LRRC3BQ96PB8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
LRRC3BQ96PB8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.39■■□□□ 1.33
LRRC3BQ96PB8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LRRC3BQ96PB8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.39■■□□□ 1.33
LRRC3BQ96PB8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRRC3BQ96PB8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LRRC3BQ96PB8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LRRC3BQ96PB8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LRRC3BQ96PB8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.38■■□□□ 1.33
LRRC3BQ96PB8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
LRRC3BQ96PB8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LRRC3BQ96PB8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRRC3BQ96PB8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms