Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX6Q8HWS3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.55■■□□□ 1.36
RFX6Q8HWS3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.55■■□□□ 1.36
RFX6Q8HWS3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFX6Q8HWS3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.55■■□□□ 1.36
RFX6Q8HWS3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX6Q8HWS3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFX6Q8HWS3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RFX6Q8HWS3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RFX6Q8HWS3 AC004448.1-201ENST00000458332 883 ntBASIC23.54■■□□□ 1.36
RFX6Q8HWS3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
RFX6Q8HWS3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFX6Q8HWS3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.53■■□□□ 1.36
RFX6Q8HWS3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.53■■□□□ 1.36
RFX6Q8HWS3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.53■■□□□ 1.36
RFX6Q8HWS3 AL031848.2-201ENST00000607670 837 ntBASIC23.53■■□□□ 1.36
RFX6Q8HWS3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RFX6Q8HWS3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX6Q8HWS3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX6Q8HWS3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RFX6Q8HWS3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 C9orf163-202ENST00000624034 2573 ntBASIC23.52■■□□□ 1.36
RFX6Q8HWS3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX6Q8HWS3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX6Q8HWS3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.51■■□□□ 1.35
RFX6Q8HWS3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.51■■□□□ 1.35
RFX6Q8HWS3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.51■■□□□ 1.35
RFX6Q8HWS3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX6Q8HWS3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.51■■□□□ 1.35
RFX6Q8HWS3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
RFX6Q8HWS3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 AC092068.2-201ENST00000590491 1708 ntBASIC23.49■■□□□ 1.35
RFX6Q8HWS3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFX6Q8HWS3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.48■■□□□ 1.35
RFX6Q8HWS3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RFX6Q8HWS3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RFX6Q8HWS3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RFX6Q8HWS3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RFX6Q8HWS3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.48■■□□□ 1.35
RFX6Q8HWS3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RFX6Q8HWS3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RFX6Q8HWS3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RFX6Q8HWS3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.46■■□□□ 1.35
RFX6Q8HWS3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RFX6Q8HWS3 AC012676.1-201ENST00000574705 1949 ntBASIC23.46■■□□□ 1.35
RFX6Q8HWS3 AC137630.3-201ENST00000607245 391 ntBASIC23.46■■□□□ 1.35
RFX6Q8HWS3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RFX6Q8HWS3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RFX6Q8HWS3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
RFX6Q8HWS3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RFX6Q8HWS3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.35
RFX6Q8HWS3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
RFX6Q8HWS3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms