Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 KRT18P60-201ENST00000312876 1297 ntBASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NHLRC3Q5JS37 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 AL121603.2-201ENST00000557373 2117 ntBASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC3Q5JS37 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 AC022616.5-201ENST00000518796 181 ntBASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC3Q5JS37 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC3Q5JS37 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.42■□□□□ 0.7
NHLRC3Q5JS37 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC3Q5JS37 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC3Q5JS37 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.42■□□□□ 0.7
NHLRC3Q5JS37 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
NHLRC3Q5JS37 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
NHLRC3Q5JS37 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NHLRC3Q5JS37 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NHLRC3Q5JS37 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NHLRC3Q5JS37 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NHLRC3Q5JS37 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 ABHD17AP5-201ENST00000580133 923 ntBASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 AL022069.1-201ENST00000568025 1636 ntBASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 AC127496.7-201ENST00000625110 1798 ntBASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.39■□□□□ 0.69
NHLRC3Q5JS37 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC3Q5JS37 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC3Q5JS37 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC3Q5JS37 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC3Q5JS37 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC3Q5JS37 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC3Q5JS37 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.38■□□□□ 0.69
NHLRC3Q5JS37 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms