Protein–RNA interactions for Protein: Q58A44

PCOTH, Prostate collagen triple helix protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTHQ58A44 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCOTHQ58A44 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.07□□□□□ -0.32
PCOTHQ58A44 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PCOTHQ58A44 C9orf163-202ENST00000624034 2573 ntBASIC13.07□□□□□ -0.32
PCOTHQ58A44 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCOTHQ58A44 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCOTHQ58A44 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PCOTHQ58A44 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCOTHQ58A44 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
PCOTHQ58A44 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PCOTHQ58A44 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC13.06□□□□□ -0.32
PCOTHQ58A44 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.06□□□□□ -0.32
PCOTHQ58A44 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
PCOTHQ58A44 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCOTHQ58A44 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 AC142472.1-201ENST00000612013 1741 ntBASIC13.05□□□□□ -0.32
PCOTHQ58A44 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 EFS-203ENST00000429593 2610 ntTSL 2 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 SPCS2P3-201ENST00000500401 656 ntBASIC13.05□□□□□ -0.32
PCOTHQ58A44 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC13.05□□□□□ -0.32
PCOTHQ58A44 AC018755.3-202ENST00000596210 929 ntBASIC13.05□□□□□ -0.32
PCOTHQ58A44 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCOTHQ58A44 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC13.04□□□□□ -0.32
PCOTHQ58A44 AL024507.2-201ENST00000606070 2574 ntBASIC13.04□□□□□ -0.32
PCOTHQ58A44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 MIR6765-201ENST00000614092 87 ntBASIC13.04□□□□□ -0.32
PCOTHQ58A44 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.04□□□□□ -0.32
PCOTHQ58A44 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PCOTHQ58A44 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PCOTHQ58A44 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCOTHQ58A44 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 AC139795.1-202ENST00000500444 432 ntBASIC13.03□□□□□ -0.32
PCOTHQ58A44 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 AC096887.2-201ENST00000623443 1957 ntBASIC13.03□□□□□ -0.32
PCOTHQ58A44 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCOTHQ58A44 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
PCOTHQ58A44 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCOTHQ58A44 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCOTHQ58A44 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCOTHQ58A44 STK25-234ENST00000535007 2459 ntTSL 2 BASIC13.02□□□□□ -0.32
PCOTHQ58A44 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCOTHQ58A44 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCOTHQ58A44 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC13.02□□□□□ -0.32
PCOTHQ58A44 AL117328.2-201ENST00000624617 1940 ntBASIC13.02□□□□□ -0.32
PCOTHQ58A44 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCOTHQ58A44 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
PCOTHQ58A44 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC13.02□□□□□ -0.33
PCOTHQ58A44 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCOTHQ58A44 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
PCOTHQ58A44 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PCOTHQ58A44 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
PCOTHQ58A44 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms