Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 Z92544.1-202ENST00000571933 1220 ntBASIC17.55■□□□□ 0.4
TM4SF20Q53R12 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF20Q53R12 AC021242.3-201ENST00000607598 1377 ntBASIC17.54■□□□□ 0.4
TM4SF20Q53R12 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
TM4SF20Q53R12 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF20Q53R12 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.54■□□□□ 0.4
TM4SF20Q53R12 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF20Q53R12 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.54■□□□□ 0.4
TM4SF20Q53R12 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF20Q53R12 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF20Q53R12 MIR4787-201ENST00000607364 84 ntBASIC17.53■□□□□ 0.4
TM4SF20Q53R12 ABCB10P4-201ENST00000566803 2184 ntBASIC17.53■□□□□ 0.4
TM4SF20Q53R12 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF20Q53R12 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF20Q53R12 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TM4SF20Q53R12 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF20Q53R12 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF20Q53R12 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF20Q53R12 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 AL161729.1-201ENST00000604104 1402 ntBASIC17.51■□□□□ 0.39
TM4SF20Q53R12 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF20Q53R12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 AC004448.1-201ENST00000458332 883 ntBASIC17.5■□□□□ 0.39
TM4SF20Q53R12 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF20Q53R12 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 SNX5-217ENST00000606557 1087 ntBASIC17.49■□□□□ 0.39
TM4SF20Q53R12 AC092028.1-203ENST00000608262 953 ntBASIC17.49■□□□□ 0.39
TM4SF20Q53R12 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF20Q53R12 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.48■□□□□ 0.39
TM4SF20Q53R12 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF20Q53R12 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms