Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SMIM11AP58511 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SMIM11AP58511 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM11AP58511 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM11AP58511 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM11AP58511 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
SMIM11AP58511 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM11AP58511 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SMIM11AP58511 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.86■□□□□ 0.93
SMIM11AP58511 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM11AP58511 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM11AP58511 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM11AP58511 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM11AP58511 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.85■□□□□ 0.93
SMIM11AP58511 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SMIM11AP58511 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM11AP58511 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.84■□□□□ 0.93
SMIM11AP58511 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SMIM11AP58511 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
SMIM11AP58511 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SMIM11AP58511 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.84■□□□□ 0.93
SMIM11AP58511 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM11AP58511 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.83■□□□□ 0.93
SMIM11AP58511 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SMIM11AP58511 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM11AP58511 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.83■□□□□ 0.93
SMIM11AP58511 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM11AP58511 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
SMIM11AP58511 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM11AP58511 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM11AP58511 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM11AP58511 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM11AP58511 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM11AP58511 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM11AP58511 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SMIM11AP58511 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM11AP58511 AC022616.5-201ENST00000518796 181 ntBASIC20.82■□□□□ 0.92
SMIM11AP58511 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM11AP58511 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.82■□□□□ 0.92
SMIM11AP58511 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM11AP58511 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM11AP58511 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM11AP58511 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMIM11AP58511 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMIM11AP58511 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMIM11AP58511 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.81■□□□□ 0.92
SMIM11AP58511 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMIM11AP58511 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMIM11AP58511 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM11AP58511 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM11AP58511 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM11AP58511 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM11AP58511 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM11AP58511 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM11AP58511 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM11AP58511 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SMIM11AP58511 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM11AP58511 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMIM11AP58511 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM11AP58511 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM11AP58511 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM11AP58511 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
SMIM11AP58511 AC131274.2-201ENST00000580697 1507 ntBASIC20.8■□□□□ 0.92
SMIM11AP58511 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SMIM11AP58511 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM11AP58511 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SMIM11AP58511 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM11AP58511 C1orf229-201ENST00000623686 2258 ntBASIC20.8■□□□□ 0.92
SMIM11AP58511 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM11AP58511 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM11AP58511 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM11AP58511 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM11AP58511 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMIM11AP58511 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM11AP58511 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM11AP58511 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.78■□□□□ 0.92
SMIM11AP58511 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM11AP58511 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.78■□□□□ 0.92
SMIM11AP58511 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM11AP58511 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM11AP58511 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM11AP58511 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.78■□□□□ 0.92
SMIM11AP58511 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM11AP58511 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms