Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
CLTCL1P53675 AC104564.3-201ENST00000582367 638 ntBASIC32.96■■■□□ 2.87
CLTCL1P53675 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CLTCL1P53675 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
CLTCL1P53675 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CLTCL1P53675 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CLTCL1P53675 AC097381.1-201ENST00000429019 1296 ntBASIC32.95■■■□□ 2.87
CLTCL1P53675 RHOF-204ENST00000537265 699 ntTSL 2 BASIC32.95■■■□□ 2.87
CLTCL1P53675 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CLTCL1P53675 MIR3181-201ENST00000578512 73 ntBASIC32.95■■■□□ 2.87
CLTCL1P53675 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.95■■■□□ 2.87
CLTCL1P53675 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CLTCL1P53675 ALDH1A3-203ENST00000557963 1670 ntBASIC32.95■■■□□ 2.87
CLTCL1P53675 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
CLTCL1P53675 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC32.95■■■□□ 2.86
CLTCL1P53675 AC087623.3-201ENST00000607047 1098 ntBASIC32.95■■■□□ 2.86
CLTCL1P53675 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
CLTCL1P53675 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
CLTCL1P53675 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
CLTCL1P53675 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CLTCL1P53675 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
CLTCL1P53675 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC32.94■■■□□ 2.86
CLTCL1P53675 ANKRD20A6P-201ENST00000618763 204 ntBASIC32.94■■■□□ 2.86
CLTCL1P53675 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CLTCL1P53675 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.93■■■□□ 2.86
CLTCL1P53675 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CLTCL1P53675 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CLTCL1P53675 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CLTCL1P53675 SLC47A1P1-202ENST00000449666 945 ntBASIC32.92■■■□□ 2.86
CLTCL1P53675 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CLTCL1P53675 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CLTCL1P53675 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
CLTCL1P53675 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CLTCL1P53675 PLD4-205ENST00000553861 667 ntTSL 2 BASIC32.91■■■□□ 2.86
CLTCL1P53675 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
CLTCL1P53675 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC32.91■■■□□ 2.86
CLTCL1P53675 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CLTCL1P53675 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC32.91■■■□□ 2.86
CLTCL1P53675 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CLTCL1P53675 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC32.9■■■□□ 2.86
CLTCL1P53675 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC32.9■■■□□ 2.86
CLTCL1P53675 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CLTCL1P53675 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CLTCL1P53675 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CLTCL1P53675 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CLTCL1P53675 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC32.89■■■□□ 2.86
CLTCL1P53675 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
CLTCL1P53675 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
CLTCL1P53675 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC32.88■■■□□ 2.85
CLTCL1P53675 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC32.88■■■□□ 2.85
CLTCL1P53675 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CLTCL1P53675 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
CLTCL1P53675 BX842568.3-201ENST00000418104 571 ntBASIC32.88■■■□□ 2.85
CLTCL1P53675 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC32.88■■■□□ 2.85
CLTCL1P53675 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CLTCL1P53675 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CLTCL1P53675 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CLTCL1P53675 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
CLTCL1P53675 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
CLTCL1P53675 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC32.87■■■□□ 2.85
CLTCL1P53675 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
CLTCL1P53675 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CLTCL1P53675 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
CLTCL1P53675 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CLTCL1P53675 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC32.86■■■□□ 2.85
CLTCL1P53675 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CLTCL1P53675 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
CLTCL1P53675 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
CLTCL1P53675 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC32.85■■■□□ 2.85
CLTCL1P53675 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CLTCL1P53675 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CLTCL1P53675 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CLTCL1P53675 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CLTCL1P53675 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CLTCL1P53675 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CLTCL1P53675 AC022211.4-201ENST00000625094 2161 ntBASIC32.85■■■□□ 2.85
CLTCL1P53675 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
CLTCL1P53675 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC32.84■■■□□ 2.85
CLTCL1P53675 AC233992.3-201ENST00000607491 485 ntBASIC32.84■■■□□ 2.85
CLTCL1P53675 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CLTCL1P53675 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
CLTCL1P53675 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC32.84■■■□□ 2.85
CLTCL1P53675 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CLTCL1P53675 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CLTCL1P53675 JTB-203ENST00000368589 1216 ntTSL 2 BASIC32.84■■■□□ 2.85
CLTCL1P53675 AC092666.2-201ENST00000613287 246 ntBASIC32.84■■■□□ 2.85
CLTCL1P53675 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.83■■■□□ 2.85
CLTCL1P53675 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CLTCL1P53675 ASB1-202ENST00000409297 878 ntTSL 5 BASIC32.83■■■□□ 2.85
CLTCL1P53675 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CLTCL1P53675 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
CLTCL1P53675 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CLTCL1P53675 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CLTCL1P53675 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CLTCL1P53675 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
CLTCL1P53675 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84
CLTCL1P53675 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CLTCL1P53675 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC32.81■■■□□ 2.84
CLTCL1P53675 AL162430.1-201ENST00000480705 870 ntBASIC32.81■■■□□ 2.84
CLTCL1P53675 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC32.81■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms