Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PBX3P40426 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.41■■□□□ 1.5
PBX3P40426 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PBX3P40426 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PBX3P40426 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PBX3P40426 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PBX3P40426 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.41■■□□□ 1.5
PBX3P40426 AC241377.3-202ENST00000626088 1088 ntBASIC24.41■■□□□ 1.5
PBX3P40426 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PBX3P40426 AC241585.3-202ENST00000628937 1088 ntBASIC24.41■■□□□ 1.5
PBX3P40426 AC245100.8-202ENST00000629247 1058 ntBASIC24.41■■□□□ 1.5
PBX3P40426 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PBX3P40426 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PBX3P40426 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PBX3P40426 AC135731.1-201ENST00000569415 2548 ntBASIC24.4■■□□□ 1.5
PBX3P40426 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.4■■□□□ 1.5
PBX3P40426 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.4■■□□□ 1.5
PBX3P40426 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.4■■□□□ 1.5
PBX3P40426 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.4■■□□□ 1.5
PBX3P40426 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PBX3P40426 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.4■■□□□ 1.5
PBX3P40426 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PBX3P40426 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PBX3P40426 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PBX3P40426 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PBX3P40426 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PBX3P40426 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.39■■□□□ 1.49
PBX3P40426 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.39■■□□□ 1.49
PBX3P40426 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.39■■□□□ 1.49
PBX3P40426 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PBX3P40426 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PBX3P40426 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PBX3P40426 IRS3P-201ENST00000223076 1006 ntBASIC24.38■■□□□ 1.49
PBX3P40426 AL162430.1-201ENST00000480705 870 ntBASIC24.38■■□□□ 1.49
PBX3P40426 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.38■■□□□ 1.49
PBX3P40426 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.38■■□□□ 1.49
PBX3P40426 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.38■■□□□ 1.49
PBX3P40426 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PBX3P40426 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PBX3P40426 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PBX3P40426 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PBX3P40426 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.37■■□□□ 1.49
PBX3P40426 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.37■■□□□ 1.49
PBX3P40426 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.37■■□□□ 1.49
PBX3P40426 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.37■■□□□ 1.49
PBX3P40426 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PBX3P40426 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PBX3P40426 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PBX3P40426 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PBX3P40426 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PBX3P40426 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.36■■□□□ 1.49
PBX3P40426 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PBX3P40426 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PBX3P40426 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.36■■□□□ 1.49
PBX3P40426 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PBX3P40426 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.36■■□□□ 1.49
PBX3P40426 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PBX3P40426 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.36■■□□□ 1.49
PBX3P40426 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.36■■□□□ 1.49
PBX3P40426 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.35■■□□□ 1.49
PBX3P40426 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PBX3P40426 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.35■■□□□ 1.49
PBX3P40426 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PBX3P40426 AC233992.3-201ENST00000607491 485 ntBASIC24.35■■□□□ 1.49
PBX3P40426 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PBX3P40426 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PBX3P40426 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PBX3P40426 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PBX3P40426 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PBX3P40426 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.33■■□□□ 1.49
PBX3P40426 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PBX3P40426 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PBX3P40426 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.33■■□□□ 1.49
PBX3P40426 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.33■■□□□ 1.49
PBX3P40426 pRNA.6-201ENST00000610482 90 ntBASIC24.33■■□□□ 1.49
PBX3P40426 pRNA.5-201ENST00000612139 90 ntBASIC24.33■■□□□ 1.49
PBX3P40426 pRNA.11-201ENST00000618423 90 ntBASIC24.33■■□□□ 1.49
PBX3P40426 pRNA.13-201ENST00000619112 90 ntBASIC24.33■■□□□ 1.49
PBX3P40426 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PBX3P40426 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.33■■□□□ 1.48
PBX3P40426 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PBX3P40426 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.32■■□□□ 1.48
PBX3P40426 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.32■■□□□ 1.48
PBX3P40426 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PBX3P40426 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PBX3P40426 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.32■■□□□ 1.48
PBX3P40426 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PBX3P40426 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PBX3P40426 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PBX3P40426 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PBX3P40426 ALDH1A3-203ENST00000557963 1670 ntBASIC24.31■■□□□ 1.48
PBX3P40426 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PBX3P40426 BX842568.3-201ENST00000418104 571 ntBASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms