Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHAC2Q9Y5I4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHAC2Q9Y5I4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 AL138724.1-201ENST00000606771 1088 ntBASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHAC2Q9Y5I4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
PCDHAC2Q9Y5I4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHAC2Q9Y5I4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHAC2Q9Y5I4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.39■■□□□ 1.98
PCDHAC2Q9Y5I4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PCDHAC2Q9Y5I4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 IRS3P-201ENST00000223076 1006 ntBASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 MIR3181-201ENST00000578512 73 ntBASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHAC2Q9Y5I4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 AC136469.2-201ENST00000623944 1028 ntBASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
PCDHAC2Q9Y5I4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
PCDHAC2Q9Y5I4 HLA-L-211ENST00000482052 1765 ntBASIC27.36■■□□□ 1.97
PCDHAC2Q9Y5I4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
PCDHAC2Q9Y5I4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHAC2Q9Y5I4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC27.36■■□□□ 1.97
PCDHAC2Q9Y5I4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.36■■□□□ 1.97
PCDHAC2Q9Y5I4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHAC2Q9Y5I4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHAC2Q9Y5I4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHAC2Q9Y5I4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHAC2Q9Y5I4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHAC2Q9Y5I4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHAC2Q9Y5I4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHAC2Q9Y5I4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHAC2Q9Y5I4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHAC2Q9Y5I4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHAC2Q9Y5I4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHAC2Q9Y5I4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 AC145676.1-201ENST00000514988 2004 ntBASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 AC009086.3-201ENST00000623486 1008 ntBASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
PCDHAC2Q9Y5I4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHAC2Q9Y5I4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 AC241377.3-202ENST00000626088 1088 ntBASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 AC241585.3-202ENST00000628937 1088 ntBASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 AC245100.8-202ENST00000629247 1058 ntBASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHAC2Q9Y5I4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.3■■□□□ 1.96
PCDHAC2Q9Y5I4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms