Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PARPBPQ9NWS1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PARPBPQ9NWS1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.31■□□□□ 0.84
PARPBPQ9NWS1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PARPBPQ9NWS1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PARPBPQ9NWS1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 MIR6724-1-201ENST00000616420 92 ntBASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 MIR6724-2-201ENST00000616483 92 ntBASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 MIR6724-4-201ENST00000617390 92 ntBASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 MIR6724-3-201ENST00000622482 92 ntBASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.29■□□□□ 0.84
PARPBPQ9NWS1 AC005703.6-201ENST00000623265 1329 ntBASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 AL356441.2-201ENST00000443009 864 ntBASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PARPBPQ9NWS1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PARPBPQ9NWS1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PARPBPQ9NWS1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PARPBPQ9NWS1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PARPBPQ9NWS1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.27■□□□□ 0.84
PARPBPQ9NWS1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.27■□□□□ 0.84
PARPBPQ9NWS1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PARPBPQ9NWS1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.27■□□□□ 0.83
PARPBPQ9NWS1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PARPBPQ9NWS1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
PARPBPQ9NWS1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 ALDH1A3-203ENST00000557963 1670 ntBASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.26■□□□□ 0.83
PARPBPQ9NWS1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 AC093323.1-202ENST00000635031 2045 ntBASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARPBPQ9NWS1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PARPBPQ9NWS1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PARPBPQ9NWS1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
PARPBPQ9NWS1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms