Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRDM9Q9NQV7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRDM9Q9NQV7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.55■■□□□ 1.04
PRDM9Q9NQV7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.55■■□□□ 1.04
PRDM9Q9NQV7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PRDM9Q9NQV7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRDM9Q9NQV7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRDM9Q9NQV7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRDM9Q9NQV7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRDM9Q9NQV7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRDM9Q9NQV7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRDM9Q9NQV7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRDM9Q9NQV7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRDM9Q9NQV7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRDM9Q9NQV7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 AC131212.1-201ENST00000613771 668 ntBASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRDM9Q9NQV7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM9Q9NQV7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM9Q9NQV7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 AC005703.6-201ENST00000623265 1329 ntBASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM9Q9NQV7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM9Q9NQV7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM9Q9NQV7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PRDM9Q9NQV7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRDM9Q9NQV7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRDM9Q9NQV7 AL356740.2-201ENST00000601559 647 ntBASIC21.45■■□□□ 1.02
PRDM9Q9NQV7 AL117332.1-201ENST00000622628 974 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms