Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 SUZ12P1-203ENST00000578195 985 ntBASIC18.39■□□□□ 0.53
NKX6-2Q9C056 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-2Q9C056 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.38■□□□□ 0.53
NKX6-2Q9C056 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-2Q9C056 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-2Q9C056 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.38■□□□□ 0.53
NKX6-2Q9C056 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NKX6-2Q9C056 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX6-2Q9C056 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX6-2Q9C056 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX6-2Q9C056 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-2Q9C056 AF106564.1-201ENST00000607058 2553 ntBASIC18.35■□□□□ 0.53
NKX6-2Q9C056 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX6-2Q9C056 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NKX6-2Q9C056 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NKX6-2Q9C056 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NKX6-2Q9C056 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NKX6-2Q9C056 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 MIR3665-201ENST00000578708 105 ntBASIC18.33■□□□□ 0.52
NKX6-2Q9C056 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-2Q9C056 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX6-2Q9C056 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 SLC6A10P-202ENST00000431994 2058 ntBASIC18.31■□□□□ 0.52
NKX6-2Q9C056 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 DUX4L28-201ENST00000623687 678 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms