Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.157e-6■■■□□ 15.7
FUBP3Q96I24 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.097e-6■■■□□ 15.7
FUBP3Q96I24 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.48□□□□□ -0.097e-6■■■□□ 15.7
FUBP3Q96I24 AGPAT5-203ENST00000523234 2525 ntTSL 513.44□□□□□ -0.267e-6■■■□□ 15.7
FUBP3Q96I24 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.337e-6■■■□□ 15.7
FUBP3Q96I24 ORMDL3-203ENST00000579287 349 ntTSL 312.79□□□□□ -0.367e-6■■■□□ 15.7
FUBP3Q96I24 ZNF670-ZNF695-201ENST00000465049 1042 ntAPPRIS P5 TSL 511.29□□□□□ -0.67e-6■■■□□ 15.7
FUBP3Q96I24 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC11.19□□□□□ -0.627e-6■■■□□ 15.7
FUBP3Q96I24 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC10.66□□□□□ -0.77e-6■■■□□ 15.7
FUBP3Q96I24 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.717e-6■■■□□ 15.7
FUBP3Q96I24 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC10.3□□□□□ -0.767e-6■■■□□ 15.7
FUBP3Q96I24 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.837e-6■■■□□ 15.7
FUBP3Q96I24 PGK1-205ENST00000491291 702 ntTSL 59.49□□□□□ -0.897e-6■■■□□ 15.7
FUBP3Q96I24 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.957e-6■■■□□ 15.7
FUBP3Q96I24 AGPAT5-202ENST00000518327 852 ntTSL 1 (best)8.96□□□□□ -0.987e-6■■■□□ 15.7
FUBP3Q96I24 DDX46-207ENST00000507392 3565 ntTSL 28.37□□□□□ -1.077e-6■■■□□ 15.7
FUBP3Q96I24 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.087e-6■■■□□ 15.7
FUBP3Q96I24 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.27e-6■■■□□ 15.7
FUBP3Q96I24 GLS-211ENST00000469774 557 ntTSL 36.81□□□□□ -1.327e-6■■■□□ 15.7
FUBP3Q96I24 DDX46-208ENST00000509178 766 ntTSL 55.67□□□□□ -1.57e-6■■■□□ 15.7
FUBP3Q96I24 AGPAT5-206ENST00000533159 488 ntTSL 34.7□□□□□ -1.667e-6■■■□□ 15.7
FUBP3Q96I24 DDX46-210ENST00000513592 571 ntTSL 44.57□□□□□ -1.687e-6■■■□□ 15.7
FUBP3Q96I24 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.87e-6■■■□□ 15.7
FUBP3Q96I24 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.857e-6■■■□□ 15.7
FUBP3Q96I24 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.58■□□□□ 0.734e-12■■■□□ 15.7
FUBP3Q96I24 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.89■□□□□ 0.454e-12■■■□□ 15.7
FUBP3Q96I24 NCEH1-204ENST00000475381 4687 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.764e-7■■■□□ 15.6
FUBP3Q96I24 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.834e-7■■■□□ 15.6
FUBP3Q96I24 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.44□□□□□ -1.064e-7■■■□□ 15.6
FUBP3Q96I24 GLYR1-207ENST00000587936 897 ntTSL 514.64□□□□□ -0.074e-6■■■□□ 15.6
FUBP3Q96I24 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.524e-6■■■□□ 15.6
FUBP3Q96I24 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC11.55□□□□□ -0.564e-6■■■□□ 15.6
FUBP3Q96I24 GLYR1-210ENST00000589389 3606 ntTSL 1 (best)11.15□□□□□ -0.624e-6■■■□□ 15.6
FUBP3Q96I24 GLYR1-209ENST00000588732 3527 ntTSL 1 (best)9.9□□□□□ -0.834e-6■■■□□ 15.6
FUBP3Q96I24 TNRC6A-207ENST00000491718 7956 ntTSL 1 (best)6.21□□□□□ -1.424e-7■■■□□ 15.6
FUBP3Q96I24 TNRC6A-216ENST00000569098 587 ntTSL 55.8□□□□□ -1.484e-7■■■□□ 15.6
FUBP3Q96I24 MAD2L1-202ENST00000333047 1277 ntTSL 1 (best)17.21■□□□□ 0.359e-8■■■□□ 15.6
FUBP3Q96I24 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.269e-8■■■□□ 15.6
FUBP3Q96I24 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.651e-13■■■□□ 15.6
FUBP3Q96I24 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.373e-7■■■□□ 15.6
FUBP3Q96I24 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.513e-7■■■□□ 15.6
FUBP3Q96I24 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.082e-6■■■□□ 15.6
FUBP3Q96I24 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.53e-6■■■□□ 15.5
FUBP3Q96I24 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.423e-6■■■□□ 15.5
FUBP3Q96I24 COBLL1-204ENST00000409184 4636 ntAPPRIS ALT2 TSL 1 (best)8.82□□□□□ -13e-6■■■□□ 15.5
FUBP3Q96I24 COBLL1-221ENST00000493868 6332 ntTSL 1 (best)8.59□□□□□ -1.043e-6■■■□□ 15.5
FUBP3Q96I24 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.093e-6■■■□□ 15.5
FUBP3Q96I24 COBLL1-223ENST00000495084 472 ntTSL 36.5□□□□□ -1.373e-6■■■□□ 15.5
FUBP3Q96I24 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.96□□□□□ -1.144e-7■■■□□ 15.5
FUBP3Q96I24 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.324e-7■■■□□ 15.5
FUBP3Q96I24 SRSF2-206ENST00000582449 1518 ntTSL 219.95■□□□□ 0.783e-6■■■□□ 15.5
FUBP3Q96I24 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.773e-6■■■□□ 15.5
FUBP3Q96I24 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.144e-6■■■□□ 15.5
FUBP3Q96I24 SRSF2-208ENST00000585202 1359 ntTSL 315.54■□□□□ 0.083e-6■■■□□ 15.5
FUBP3Q96I24 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.173e-6■■■□□ 15.5
FUBP3Q96I24 SRSF2-209ENST00000586778 1001 ntTSL 24.99□□□□□ -1.613e-6■■■□□ 15.5
FUBP3Q96I24 NEDD9-204ENST00000448183 4934 ntTSL 1 (best)7.6□□□□□ -1.199e-9■■■□□ 15.5
FUBP3Q96I24 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.75□□□□□ -1.339e-9■■■□□ 15.5
FUBP3Q96I24 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.359e-9■■■□□ 15.5
FUBP3Q96I24 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.9□□□□□ -0.183e-7■■■□□ 15.5
FUBP3Q96I24 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.213e-7■■■□□ 15.5
FUBP3Q96I24 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.591e-6■■■□□ 15.4
FUBP3Q96I24 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.544e-7■■■□□ 15.4
FUBP3Q96I24 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.3□□□□□ -1.242e-7■■■□□ 15.4
FUBP3Q96I24 AKAP1-209ENST00000572560 442 ntTSL 316.95■□□□□ 0.34e-7■■■□□ 15.4
FUBP3Q96I24 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.084e-7■■■□□ 15.4
FUBP3Q96I24 AKAP1-214ENST00000575032 570 ntTSL 314.47□□□□□ -0.094e-7■■■□□ 15.4
FUBP3Q96I24 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.694e-7■■■□□ 15.4
FUBP3Q96I24 AKAP1-203ENST00000481416 4089 ntTSL 59.84□□□□□ -0.834e-7■■■□□ 15.4
FUBP3Q96I24 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.471e-9■■■□□ 15.4
FUBP3Q96I24 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.337e-8■■■□□ 15.4
FUBP3Q96I24 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.946e-7■■■□□ 15.4
FUBP3Q96I24 REV1-203ENST00000413697 4727 ntTSL 219.6■□□□□ 0.736e-7■■■□□ 15.4
FUBP3Q96I24 TM2D1-208ENST00000488206 921 ntTSL 516.66■□□□□ 0.268e-13■■■□□ 15.4
FUBP3Q96I24 TMEM165-206ENST00000508561 756 ntTSL 514.59□□□□□ -0.078e-13■■■□□ 15.4
FUBP3Q96I24 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.33□□□□□ -0.126e-7■■■□□ 15.4
FUBP3Q96I24 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.186e-7■■■□□ 15.4
FUBP3Q96I24 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.276e-7■■■□□ 15.4
FUBP3Q96I24 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.37□□□□□ -0.436e-7■■■□□ 15.4
FUBP3Q96I24 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC12.15□□□□□ -0.466e-7■■■□□ 15.4
FUBP3Q96I24 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.918e-13■■■□□ 15.4
FUBP3Q96I24 TMEM165-210ENST00000514904 1522 ntTSL 29.32□□□□□ -0.928e-13■■■□□ 15.4
FUBP3Q96I24 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.936e-7■■■□□ 15.4
FUBP3Q96I24 ELP1-202ENST00000467959 437 ntTSL 38.98□□□□□ -0.976e-7■■■□□ 15.4
FUBP3Q96I24 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.7□□□□□ -1.186e-7■■■□□ 15.4
FUBP3Q96I24 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.7□□□□□ -1.186e-7■■■□□ 15.4
FUBP3Q96I24 ELP1-203ENST00000495759 2840 ntTSL 1 (best)7.23□□□□□ -1.256e-7■■■□□ 15.4
FUBP3Q96I24 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.378e-13■■■□□ 15.4
FUBP3Q96I24 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.428e-13■■■□□ 15.4
FUBP3Q96I24 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.488e-13■■■□□ 15.4
FUBP3Q96I24 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.86□□□□□ -1.317e-7■■■□□ 15.4
FUBP3Q96I24 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.063e-15■■■□□ 15.3
FUBP3Q96I24 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.36■□□□□ 0.212e-19■■■□□ 15.3
FUBP3Q96I24 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.222e-19■■■□□ 15.3
FUBP3Q96I24 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-19■■■□□ 15.3
FUBP3Q96I24 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.942e-19■■■□□ 15.3
FUBP3Q96I24 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC8.8□□□□□ -12e-19■■■□□ 15.3
FUBP3Q96I24 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.786e-6■■■□□ 15.3
FUBP3Q96I24 MTMR12-202ENST00000280285 4966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.516e-6■■■□□ 15.3
FUBP3Q96I24 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.462e-7■■■□□ 15.3
Retrieved 100 of 4,568 protein–RNA pairs in 99 ms