RNA–Protein interactions for RNA: ENST00000452510.6

DDX46-202, Transcript of DEAD-box helicase 46, humanhuman

TSL 1 (best) BASIC

Gene DDX46, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-202ENST00000452510 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
DDX46-202ENST00000452510 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
DDX46-202ENST00000452510 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
DDX46-202ENST00000452510 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
DDX46-202ENST00000452510 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
DDX46-202ENST00000452510 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
DDX46-202ENST00000452510 APLP2Q06481 763 aa16.33■□□□□ 0.2
DDX46-202ENST00000452510 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
DDX46-202ENST00000452510 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.18
DDX46-202ENST00000452510 PCGF6Q9BYE7 350 aa16.09■□□□□ 0.17
DDX46-202ENST00000452510 TRIM41Q8WV44 630 aa16.08■□□□□ 0.17
DDX46-202ENST00000452510 ATP1B4Q9UN42 357 aaPredicted RBP15.93■□□□□ 0.14
DDX46-202ENST00000452510 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
DDX46-202ENST00000452510 PELP1Q8IZL8 1130 aaKnown RBP15.83■□□□□ 0.12
DDX46-202ENST00000452510 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
DDX46-202ENST00000452510 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
DDX46-202ENST00000452510 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
DDX46-202ENST00000452510 CENPBP07199 599 aaPredicted RBP15.48■□□□□ 0.07
DDX46-202ENST00000452510 LOC105371045A0A1W2PR82 267 aa15.47■□□□□ 0.07
DDX46-202ENST00000452510 CHIC1Q5VXU3 224 aa15.43■□□□□ 0.06
DDX46-202ENST00000452510 ABCC9O60706 1549 aa15.41■□□□□ 0.06
DDX46-202ENST00000452510 ITGAEP38570 1179 aa15.4■□□□□ 0.06
DDX46-202ENST00000452510 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
DDX46-202ENST00000452510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
DDX46-202ENST00000452510 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
DDX46-202ENST00000452510 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
DDX46-202ENST00000452510 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
DDX46-202ENST00000452510 MYT1LQ9UL68 1186 aa15.28■□□□□ 0.04
DDX46-202ENST00000452510 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
DDX46-202ENST00000452510 NEFLP07196 543 aa15.19■□□□□ 0.02
DDX46-202ENST00000452510 POLR3GLQ9BT43 218 aa15.16■□□□□ 0.02
DDX46-202ENST00000452510 HRCP23327 699 aa15.13■□□□□ 0.01
DDX46-202ENST00000452510 CNGB1Q14028 1251 aaPredicted RBP15.07■□□□□ 0
DDX46-202ENST00000452510 FAM50AQ14320 339 aaKnown RBP15□□□□□ -0.01
DDX46-202ENST00000452510 FBLN2P98095 1184 aa14.9□□□□□ -0.02
DDX46-202ENST00000452510 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
DDX46-202ENST00000452510 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
DDX46-202ENST00000452510 NEUROD1Q13562 356 aa14.83□□□□□ -0.03
DDX46-202ENST00000452510 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
DDX46-202ENST00000452510 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
DDX46-202ENST00000452510 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
DDX46-202ENST00000452510 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
DDX46-202ENST00000452510 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
DDX46-202ENST00000452510 ZNF326Q5BKZ1 582 aaKnown RBP14.72□□□□□ -0.05
DDX46-202ENST00000452510 DAXXQ9UER7 740 aaPredicted RBP14.68□□□□□ -0.06
DDX46-202ENST00000452510 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
DDX46-202ENST00000452510 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
DDX46-202ENST00000452510 ANP32CO43423 234 aa14.53□□□□□ -0.08
DDX46-202ENST00000452510 CLSPNQ9HAW4 1339 aa14.52□□□□□ -0.09
DDX46-202ENST00000452510 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
DDX46-202ENST00000452510 BCANQ96GW7 911 aa14.48□□□□□ -0.09
DDX46-202ENST00000452510 CCDC180Q9P1Z9 1646 aa14.47□□□□□ -0.09
DDX46-202ENST00000452510 CDK11AQ9UQ88 783 aaPredicted RBP14.46□□□□□ -0.09
DDX46-202ENST00000452510 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
DDX46-202ENST00000452510 MYT1Q01538 1121 aa14.37□□□□□ -0.11
DDX46-202ENST00000452510 SLC24A1O60721 1099 aa14.33□□□□□ -0.11
DDX46-202ENST00000452510 CHIC2Q9UKJ5 165 aa14.33□□□□□ -0.11
DDX46-202ENST00000452510 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
DDX46-202ENST00000452510 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
DDX46-202ENST00000452510 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
DDX46-202ENST00000452510 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
DDX46-202ENST00000452510 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX46-202ENST00000452510 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
DDX46-202ENST00000452510 RTL5Q5HYW3 569 aaPredicted RBP14.28□□□□□ -0.12
DDX46-202ENST00000452510 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
DDX46-202ENST00000452510 CANXP27824 592 aaKnown RBP14.28□□□□□ -0.12
DDX46-202ENST00000452510 CHMP7Q8WUX9 453 aaPredicted RBP14.26□□□□□ -0.13
DDX46-202ENST00000452510 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
DDX46-202ENST00000452510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■□□□ 13.4
DDX46-202ENST00000452510 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
DDX46-202ENST00000452510 NEFMP07197 916 aa14.25□□□□□ -0.13
DDX46-202ENST00000452510 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
DDX46-202ENST00000452510 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
DDX46-202ENST00000452510 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.13
DDX46-202ENST00000452510 DDX10Q13206 875 aaKnown RBP14.2□□□□□ -0.14
DDX46-202ENST00000452510 CLIP1P30622 1438 aa14.2□□□□□ -0.14
DDX46-202ENST00000452510 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
DDX46-202ENST00000452510 TSPY4P0CV99 314 aa14.17□□□□□ -0.14
DDX46-202ENST00000452510 TSPY10P0CW01 314 aa14.17□□□□□ -0.14
DDX46-202ENST00000452510 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.15
DDX46-202ENST00000452510 NACADO15069 1562 aa14.14□□□□□ -0.15
DDX46-202ENST00000452510 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
DDX46-202ENST00000452510 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
DDX46-202ENST00000452510 FAM9BQ8IZU0 186 aa14.13□□□□□ -0.15
DDX46-202ENST00000452510 SALL2Q9Y467 1007 aaPredicted RBP14.12□□□□□ -0.15
DDX46-202ENST00000452510 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX46-202ENST00000452510 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
DDX46-202ENST00000452510 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
DDX46-202ENST00000452510 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
DDX46-202ENST00000452510 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
DDX46-202ENST00000452510 CEP162Q5TB80 1403 aa14.08□□□□□ -0.15
DDX46-202ENST00000452510 GOLGA3Q08378 1498 aa14.08□□□□□ -0.16
DDX46-202ENST00000452510 FKBP8Q14318 412 aa14.06□□□□□ -0.16
DDX46-202ENST00000452510 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
DDX46-202ENST00000452510 EEA1Q15075 1411 aa14.04□□□□□ -0.16
DDX46-202ENST00000452510 PLEKHD1A6NEE1 506 aa14.03□□□□□ -0.16
DDX46-202ENST00000452510 TMC1Q8TDI8 760 aa14.03□□□□□ -0.16
DDX46-202ENST00000452510 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.16
DDX46-202ENST00000452510 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.17
DDX46-202ENST00000452510 KIF27Q86VH2 1401 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms