RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
ZKSCAN1-205ENST00000535170 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.52
ZKSCAN1-205ENST00000535170 PELP1Q8IZL8 1130 aaKnown RBP18.12■□□□□ 0.49
ZKSCAN1-205ENST00000535170 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
ZKSCAN1-205ENST00000535170 APLP2Q06481 763 aa17.6■□□□□ 0.41
ZKSCAN1-205ENST00000535170 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
ZKSCAN1-205ENST00000535170 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
ZKSCAN1-205ENST00000535170 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
ZKSCAN1-205ENST00000535170 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
ZKSCAN1-205ENST00000535170 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
ZKSCAN1-205ENST00000535170 MYT1Q01538 1121 aa16.91■□□□□ 0.3
ZKSCAN1-205ENST00000535170 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.29
ZKSCAN1-205ENST00000535170 NEFLP07196 543 aa16.69■□□□□ 0.26
ZKSCAN1-205ENST00000535170 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
ZKSCAN1-205ENST00000535170 EHMT2Q96KQ7 1210 aa16.54■□□□□ 0.24
ZKSCAN1-205ENST00000535170 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
ZKSCAN1-205ENST00000535170 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
ZKSCAN1-205ENST00000535170 PCGF6Q9BYE7 350 aa16.45■□□□□ 0.22
ZKSCAN1-205ENST00000535170 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
ZKSCAN1-205ENST00000535170 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
ZKSCAN1-205ENST00000535170 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
ZKSCAN1-205ENST00000535170 TTBK1Q5TCY1 1321 aaPredicted RBP16.13■□□□□ 0.17
ZKSCAN1-205ENST00000535170 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
ZKSCAN1-205ENST00000535170 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
ZKSCAN1-205ENST00000535170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
ZKSCAN1-205ENST00000535170 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
ZKSCAN1-205ENST00000535170 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
ZKSCAN1-205ENST00000535170 RTL5Q5HYW3 569 aaPredicted RBP15.81■□□□□ 0.12
ZKSCAN1-205ENST00000535170 CCDC180Q9P1Z9 1646 aa15.77■□□□□ 0.12
ZKSCAN1-205ENST00000535170 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
ZKSCAN1-205ENST00000535170 CLSPNQ9HAW4 1339 aa15.71■□□□□ 0.11
ZKSCAN1-205ENST00000535170 NEFMP07197 916 aa15.7■□□□□ 0.1
ZKSCAN1-205ENST00000535170 HRCP23327 699 aa15.7■□□□□ 0.1
ZKSCAN1-205ENST00000535170 POLR3GLQ9BT43 218 aa15.67■□□□□ 0.1
ZKSCAN1-205ENST00000535170 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
ZKSCAN1-205ENST00000535170 ITGAEP38570 1179 aa15.63■□□□□ 0.09
ZKSCAN1-205ENST00000535170 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
ZKSCAN1-205ENST00000535170 CDK11AQ9UQ88 783 aaPredicted RBP15.56■□□□□ 0.08
ZKSCAN1-205ENST00000535170 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
ZKSCAN1-205ENST00000535170 ANP32CO43423 234 aa15.54■□□□□ 0.08
ZKSCAN1-205ENST00000535170 FAM50AQ14320 339 aaKnown RBP15.52■□□□□ 0.07
ZKSCAN1-205ENST00000535170 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
ZKSCAN1-205ENST00000535170 TRIM52Q96A61 297 aa15.48■□□□□ 0.07
ZKSCAN1-205ENST00000535170 ABCC9O60706 1549 aa15.44■□□□□ 0.06
ZKSCAN1-205ENST00000535170 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
ZKSCAN1-205ENST00000535170 PPARGC1BQ86YN6 1023 aaKnown RBP15.36■□□□□ 0.05
ZKSCAN1-205ENST00000535170 ANP32BQ92688 251 aaKnown RBP15.35■□□□□ 0.05
ZKSCAN1-205ENST00000535170 ESF1Q9H501 851 aaKnown RBP15.32■□□□□ 0.04
ZKSCAN1-205ENST00000535170 ANP32AP39687 249 aaKnown RBP15.29■□□□□ 0.04
ZKSCAN1-205ENST00000535170 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
ZKSCAN1-205ENST00000535170 EIF5BO60841 1220 aaKnown RBP15.26■□□□□ 0.03
ZKSCAN1-205ENST00000535170 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
ZKSCAN1-205ENST00000535170 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
ZKSCAN1-205ENST00000535170 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
ZKSCAN1-205ENST00000535170 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
ZKSCAN1-205ENST00000535170 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
ZKSCAN1-205ENST00000535170 BCANQ96GW7 911 aa15.19■□□□□ 0.02
ZKSCAN1-205ENST00000535170 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
ZKSCAN1-205ENST00000535170 TONSLQ96HA7 1378 aa15.17■□□□□ 0.02
ZKSCAN1-205ENST00000535170 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
ZKSCAN1-205ENST00000535170 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
ZKSCAN1-205ENST00000535170 FBLN2P98095 1184 aa15.15■□□□□ 0.02
ZKSCAN1-205ENST00000535170 EEA1Q15075 1411 aa15.15■□□□□ 0.02
ZKSCAN1-205ENST00000535170 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.01
ZKSCAN1-205ENST00000535170 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
ZKSCAN1-205ENST00000535170 NACADO15069 1562 aa15.11■□□□□ 0.01
ZKSCAN1-205ENST00000535170 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
ZKSCAN1-205ENST00000535170 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
ZKSCAN1-205ENST00000535170 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
ZKSCAN1-205ENST00000535170 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
ZKSCAN1-205ENST00000535170 GLIPR1L2Q4G1C9 344 aa15.08■□□□□ 0
ZKSCAN1-205ENST00000535170 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
ZKSCAN1-205ENST00000535170 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
ZKSCAN1-205ENST00000535170 RSF1Q96T23 1441 aaPredicted RBP15.06■□□□□ 0
ZKSCAN1-205ENST00000535170 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
ZKSCAN1-205ENST00000535170 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
ZKSCAN1-205ENST00000535170 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
ZKSCAN1-205ENST00000535170 CDCA8Q53HL2 280 aa14.96□□□□□ -0.01
ZKSCAN1-205ENST00000535170 CDK11BP21127 795 aaKnown RBP14.95□□□□□ -0.02
ZKSCAN1-205ENST00000535170 MTUS2Q5JR59 1369 aa14.92□□□□□ -0.02
ZKSCAN1-205ENST00000535170 ZNF777Q9ULD5 760 aaPredicted RBP14.92□□□□□ -0.02
ZKSCAN1-205ENST00000535170 WDR43Q15061 677 aaKnown RBP eCLIP14.92□□□□□ -0.023e-6■■■■■ 38.4
ZKSCAN1-205ENST00000535170 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
ZKSCAN1-205ENST00000535170 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
ZKSCAN1-205ENST00000535170 CHMP4BQ9H444 224 aaKnown RBP14.9□□□□□ -0.02
ZKSCAN1-205ENST00000535170 TMC1Q8TDI8 760 aa14.88□□□□□ -0.03
ZKSCAN1-205ENST00000535170 BECN1Q14457 450 aa14.85□□□□□ -0.03
ZKSCAN1-205ENST00000535170 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
ZKSCAN1-205ENST00000535170 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
ZKSCAN1-205ENST00000535170 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
ZKSCAN1-205ENST00000535170 CASC1Q6TDU7 716 aa14.8□□□□□ -0.04
ZKSCAN1-205ENST00000535170 CLIP1P30622 1438 aa14.79□□□□□ -0.04
ZKSCAN1-205ENST00000535170 NCLP19338 710 aaKnown RBP14.78□□□□□ -0.04
ZKSCAN1-205ENST00000535170 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
ZKSCAN1-205ENST00000535170 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
ZKSCAN1-205ENST00000535170 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
ZKSCAN1-205ENST00000535170 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
ZKSCAN1-205ENST00000535170 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
ZKSCAN1-205ENST00000535170 CCDC136Q96JN2 1154 aa14.77□□□□□ -0.05
ZKSCAN1-205ENST00000535170 CHGAP10645 457 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms