RNA–Protein interactions for RNA: ENST00000269187.9

SLC39A6-201, Transcript of solute carrier family 39 member 6, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLC39A6, Length 3,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A6-201ENST00000269187 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
SLC39A6-201ENST00000269187 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
SLC39A6-201ENST00000269187 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
SLC39A6-201ENST00000269187 DCAF1Q9Y4B6 1507 aa18.11■□□□□ 0.49
SLC39A6-201ENST00000269187 MYO15BQ96JP2 1530 aa17.86■□□□□ 0.45
SLC39A6-201ENST00000269187 NACADO15069 1562 aa17.53■□□□□ 0.4
SLC39A6-201ENST00000269187 ABCC9O60706 1549 aa17.31■□□□□ 0.36
SLC39A6-201ENST00000269187 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
SLC39A6-201ENST00000269187 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.36
SLC39A6-201ENST00000269187 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
SLC39A6-201ENST00000269187 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
SLC39A6-201ENST00000269187 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
SLC39A6-201ENST00000269187 BICRAQ9NZM4 1560 aa16.8■□□□□ 0.28
SLC39A6-201ENST00000269187 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
SLC39A6-201ENST00000269187 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
SLC39A6-201ENST00000269187 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
SLC39A6-201ENST00000269187 HRCP23327 699 aa16.67■□□□□ 0.26
SLC39A6-201ENST00000269187 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
SLC39A6-201ENST00000269187 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
SLC39A6-201ENST00000269187 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
SLC39A6-201ENST00000269187 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.24
SLC39A6-201ENST00000269187 WIZO95785 1651 aa16.55■□□□□ 0.24
SLC39A6-201ENST00000269187 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
SLC39A6-201ENST00000269187 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
SLC39A6-201ENST00000269187 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
SLC39A6-201ENST00000269187 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
SLC39A6-201ENST00000269187 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
SLC39A6-201ENST00000269187 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
SLC39A6-201ENST00000269187 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
SLC39A6-201ENST00000269187 HMGXB3Q12766 1538 aa16.21■□□□□ 0.18
SLC39A6-201ENST00000269187 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
SLC39A6-201ENST00000269187 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
SLC39A6-201ENST00000269187 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
SLC39A6-201ENST00000269187 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
SLC39A6-201ENST00000269187 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
SLC39A6-201ENST00000269187 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
SLC39A6-201ENST00000269187 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
SLC39A6-201ENST00000269187 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
SLC39A6-201ENST00000269187 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.12
SLC39A6-201ENST00000269187 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
SLC39A6-201ENST00000269187 CFTRP13569 1480 aa15.8■□□□□ 0.12
SLC39A6-201ENST00000269187 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
SLC39A6-201ENST00000269187 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
SLC39A6-201ENST00000269187 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.11
SLC39A6-201ENST00000269187 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
SLC39A6-201ENST00000269187 EEA1Q15075 1411 aa15.74■□□□□ 0.11
SLC39A6-201ENST00000269187 WRNQ14191 1432 aaPredicted RBP eCLIP15.73■□□□□ 0.11
SLC39A6-201ENST00000269187 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
SLC39A6-201ENST00000269187 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
SLC39A6-201ENST00000269187 KIF21BO75037 1637 aa15.61■□□□□ 0.09
SLC39A6-201ENST00000269187 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
SLC39A6-201ENST00000269187 CUX1P39880 1505 aa15.59■□□□□ 0.09
SLC39A6-201ENST00000269187 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
SLC39A6-201ENST00000269187 SOGA1O94964 1423 aa15.54■□□□□ 0.08
SLC39A6-201ENST00000269187 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
SLC39A6-201ENST00000269187 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
SLC39A6-201ENST00000269187 MYT1Q01538 1121 aa15.46■□□□□ 0.06
SLC39A6-201ENST00000269187 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
SLC39A6-201ENST00000269187 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
SLC39A6-201ENST00000269187 GOLGA3Q08378 1498 aa15.44■□□□□ 0.06
SLC39A6-201ENST00000269187 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
SLC39A6-201ENST00000269187 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
SLC39A6-201ENST00000269187 WDR97A6NE52 1622 aa15.41■□□□□ 0.06
SLC39A6-201ENST00000269187 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
SLC39A6-201ENST00000269187 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
SLC39A6-201ENST00000269187 ACIN1Q9UKV3 1341 aaKnown RBP15.37■□□□□ 0.05
SLC39A6-201ENST00000269187 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
SLC39A6-201ENST00000269187 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
SLC39A6-201ENST00000269187 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
SLC39A6-201ENST00000269187 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
SLC39A6-201ENST00000269187 NESP48681 1621 aa15.32■□□□□ 0.04
SLC39A6-201ENST00000269187 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
SLC39A6-201ENST00000269187 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
SLC39A6-201ENST00000269187 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
SLC39A6-201ENST00000269187 CEP162Q5TB80 1403 aa15.3■□□□□ 0.04
SLC39A6-201ENST00000269187 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
SLC39A6-201ENST00000269187 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.04
SLC39A6-201ENST00000269187 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
SLC39A6-201ENST00000269187 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
SLC39A6-201ENST00000269187 ABCA5Q8WWZ7 1642 aa15.25■□□□□ 0.03
SLC39A6-201ENST00000269187 CUL7Q14999 1698 aa15.24■□□□□ 0.03
SLC39A6-201ENST00000269187 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
SLC39A6-201ENST00000269187 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.03
SLC39A6-201ENST00000269187 CUX2O14529 1486 aa15.18■□□□□ 0.02
SLC39A6-201ENST00000269187 WDR62O43379 1518 aa15.17■□□□□ 0.02
SLC39A6-201ENST00000269187 IGF1RP08069 1367 aa15.16■□□□□ 0.02
SLC39A6-201ENST00000269187 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
SLC39A6-201ENST00000269187 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
SLC39A6-201ENST00000269187 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
SLC39A6-201ENST00000269187 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
SLC39A6-201ENST00000269187 CLIP1P30622 1438 aa15.11■□□□□ 0.01
SLC39A6-201ENST00000269187 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
SLC39A6-201ENST00000269187 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
SLC39A6-201ENST00000269187 RAD54L2Q9Y4B4 1467 aa15.09■□□□□ 0.01
SLC39A6-201ENST00000269187 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
SLC39A6-201ENST00000269187 DIEXFQ68CQ4 756 aaKnown RBP15.08■□□□□ 0.01
SLC39A6-201ENST00000269187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
SLC39A6-201ENST00000269187 ARAP1Q96P48 1450 aa15.06■□□□□ 0
SLC39A6-201ENST00000269187 CARMIL1Q5VZK9 1371 aa15.04■□□□□ -0
SLC39A6-201ENST00000269187 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms