RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 NISCHQ9Y2I1 1504 aa22.54■■□□□ 1.2
TSC22D1-203ENST00000458659 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
TSC22D1-203ENST00000458659 SHROOM4Q9ULL8 1493 aa21.74■■□□□ 1.07
TSC22D1-203ENST00000458659 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
TSC22D1-203ENST00000458659 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
TSC22D1-203ENST00000458659 EHMT2Q96KQ7 1210 aa21.03■□□□□ 0.96
TSC22D1-203ENST00000458659 HRCP23327 699 aa20.92■□□□□ 0.94
TSC22D1-203ENST00000458659 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
TSC22D1-203ENST00000458659 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
TSC22D1-203ENST00000458659 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
TSC22D1-203ENST00000458659 LOC105371045A0A1W2PR82 267 aa20.42■□□□□ 0.86
TSC22D1-203ENST00000458659 TTBK1Q5TCY1 1321 aaPredicted RBP20.4■□□□□ 0.86
TSC22D1-203ENST00000458659 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
TSC22D1-203ENST00000458659 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
TSC22D1-203ENST00000458659 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
TSC22D1-203ENST00000458659 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
TSC22D1-203ENST00000458659 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
TSC22D1-203ENST00000458659 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
TSC22D1-203ENST00000458659 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
TSC22D1-203ENST00000458659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
TSC22D1-203ENST00000458659 MYO15BQ96JP2 1530 aa19.76■□□□□ 0.75
TSC22D1-203ENST00000458659 GTF3C3Q9Y5Q9 886 aa19.72■□□□□ 0.75
TSC22D1-203ENST00000458659 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
TSC22D1-203ENST00000458659 MYT1Q01538 1121 aa19.72■□□□□ 0.75
TSC22D1-203ENST00000458659 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
TSC22D1-203ENST00000458659 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
TSC22D1-203ENST00000458659 ACIN1Q9UKV3 1341 aaKnown RBP19.52■□□□□ 0.72
TSC22D1-203ENST00000458659 APLP2Q06481 763 aa19.49■□□□□ 0.71
TSC22D1-203ENST00000458659 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
TSC22D1-203ENST00000458659 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
TSC22D1-203ENST00000458659 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
TSC22D1-203ENST00000458659 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
TSC22D1-203ENST00000458659 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
TSC22D1-203ENST00000458659 BCANQ96GW7 911 aa19.09■□□□□ 0.65
TSC22D1-203ENST00000458659 ZNF316A6NFI3 1004 aaPredicted RBP19.06■□□□□ 0.64
TSC22D1-203ENST00000458659 NEFLP07196 543 aa19.04■□□□□ 0.64
TSC22D1-203ENST00000458659 ITGAEP38570 1179 aa19.02■□□□□ 0.64
TSC22D1-203ENST00000458659 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
TSC22D1-203ENST00000458659 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
TSC22D1-203ENST00000458659 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
TSC22D1-203ENST00000458659 MIER1Q8N108 512 aa18.87■□□□□ 0.61
TSC22D1-203ENST00000458659 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
TSC22D1-203ENST00000458659 FKBP8Q14318 412 aa18.57■□□□□ 0.56
TSC22D1-203ENST00000458659 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
TSC22D1-203ENST00000458659 POLR3GLQ9BT43 218 aa18.42■□□□□ 0.54
TSC22D1-203ENST00000458659 ANP32EQ9BTT0 268 aa18.41■□□□□ 0.54
TSC22D1-203ENST00000458659 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
TSC22D1-203ENST00000458659 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
TSC22D1-203ENST00000458659 SCRIBQ14160 1630 aa18.39■□□□□ 0.54
TSC22D1-203ENST00000458659 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
TSC22D1-203ENST00000458659 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
TSC22D1-203ENST00000458659 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
TSC22D1-203ENST00000458659 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.53
TSC22D1-203ENST00000458659 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.53
TSC22D1-203ENST00000458659 ANP32CO43423 234 aa18.33■□□□□ 0.52
TSC22D1-203ENST00000458659 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
TSC22D1-203ENST00000458659 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
TSC22D1-203ENST00000458659 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
TSC22D1-203ENST00000458659 RTL5Q5HYW3 569 aaPredicted RBP18.25■□□□□ 0.51
TSC22D1-203ENST00000458659 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
TSC22D1-203ENST00000458659 ABCC9O60706 1549 aa18.24■□□□□ 0.51
TSC22D1-203ENST00000458659 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
TSC22D1-203ENST00000458659 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
TSC22D1-203ENST00000458659 NBR1Q14596 966 aa18.18■□□□□ 0.5
TSC22D1-203ENST00000458659 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
TSC22D1-203ENST00000458659 RB1CC1Q8TDY2 1594 aa18.13■□□□□ 0.49
TSC22D1-203ENST00000458659 P3H3Q8IVL6 736 aa18.09■□□□□ 0.49
TSC22D1-203ENST00000458659 NPM2Q86SE8 214 aaKnown RBP18.05■□□□□ 0.48
TSC22D1-203ENST00000458659 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
TSC22D1-203ENST00000458659 DAXXQ9UER7 740 aaPredicted RBP18.04■□□□□ 0.48
TSC22D1-203ENST00000458659 CLIP1P30622 1438 aa18.03■□□□□ 0.48
TSC22D1-203ENST00000458659 RBM19Q9Y4C8 960 aaKnown RBP18.02■□□□□ 0.48
TSC22D1-203ENST00000458659 SOGA1O94964 1423 aa18■□□□□ 0.47
TSC22D1-203ENST00000458659 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
TSC22D1-203ENST00000458659 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
TSC22D1-203ENST00000458659 TNIKQ9UKE5 1360 aa17.97■□□□□ 0.47
TSC22D1-203ENST00000458659 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
TSC22D1-203ENST00000458659 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
TSC22D1-203ENST00000458659 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
TSC22D1-203ENST00000458659 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
TSC22D1-203ENST00000458659 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
TSC22D1-203ENST00000458659 EIF5BO60841 1220 aaKnown RBP17.88■□□□□ 0.45
TSC22D1-203ENST00000458659 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
TSC22D1-203ENST00000458659 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
TSC22D1-203ENST00000458659 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
TSC22D1-203ENST00000458659 RTN4Q9NQC3 1192 aaKnown RBP17.85■□□□□ 0.45
TSC22D1-203ENST00000458659 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
TSC22D1-203ENST00000458659 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
TSC22D1-203ENST00000458659 B4GALNT3Q6L9W6 998 aa17.78■□□□□ 0.44
TSC22D1-203ENST00000458659 CCDC136Q96JN2 1154 aa17.77■□□□□ 0.44
TSC22D1-203ENST00000458659 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
TSC22D1-203ENST00000458659 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
TSC22D1-203ENST00000458659 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
TSC22D1-203ENST00000458659 DEKP35659 375 aaKnown RBP17.75■□□□□ 0.43
TSC22D1-203ENST00000458659 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
TSC22D1-203ENST00000458659 CHIC2Q9UKJ5 165 aa17.7■□□□□ 0.42
TSC22D1-203ENST00000458659 EEA1Q15075 1411 aa17.69■□□□□ 0.42
TSC22D1-203ENST00000458659 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
TSC22D1-203ENST00000458659 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
TSC22D1-203ENST00000458659 MYT1LQ9UL68 1186 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms