RNA–Protein interactions for RNA: ENST00000493868.5

COBLL1-221, Transcript of cordon-bleu WH2 repeat protein like 1, humanhuman

TSL 1 (best)

Gene COBLL1, Length 6,332 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1-221ENST00000493868 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
COBLL1-221ENST00000493868 DCAF8L2P0C7V8 631 aa14.53□□□□□ -0.08
COBLL1-221ENST00000493868 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
COBLL1-221ENST00000493868 SHROOM4Q9ULL8 1493 aa14□□□□□ -0.17
COBLL1-221ENST00000493868 MYT1Q01538 1121 aa13.73□□□□□ -0.21
COBLL1-221ENST00000493868 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
COBLL1-221ENST00000493868 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
COBLL1-221ENST00000493868 APLP2Q06481 763 aa13.43□□□□□ -0.26
COBLL1-221ENST00000493868 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
COBLL1-221ENST00000493868 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
COBLL1-221ENST00000493868 TRIM41Q8WV44 630 aa13.28□□□□□ -0.28
COBLL1-221ENST00000493868 CENPBP07199 599 aaPredicted RBP13.24□□□□□ -0.29
COBLL1-221ENST00000493868 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
COBLL1-221ENST00000493868 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
COBLL1-221ENST00000493868 TRIM26Q12899 539 aaPredicted RBP13.11□□□□□ -0.31
COBLL1-221ENST00000493868 HRCP23327 699 aa13.08□□□□□ -0.32
COBLL1-221ENST00000493868 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
COBLL1-221ENST00000493868 CHIC1Q5VXU3 224 aa12.98□□□□□ -0.33
COBLL1-221ENST00000493868 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
COBLL1-221ENST00000493868 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
COBLL1-221ENST00000493868 RANGAP1P46060 587 aaPredicted RBP12.8□□□□□ -0.36
COBLL1-221ENST00000493868 NEFLP07196 543 aa12.79□□□□□ -0.36
COBLL1-221ENST00000493868 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
COBLL1-221ENST00000493868 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
COBLL1-221ENST00000493868 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
COBLL1-221ENST00000493868 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
COBLL1-221ENST00000493868 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
COBLL1-221ENST00000493868 ZCCHC6Q5VYS8 1495 aaKnown RBP12.66□□□□□ -0.38
COBLL1-221ENST00000493868 DCAF1Q9Y4B6 1507 aa12.55□□□□□ -0.4
COBLL1-221ENST00000493868 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
COBLL1-221ENST00000493868 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
COBLL1-221ENST00000493868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
COBLL1-221ENST00000493868 ABCC9O60706 1549 aa12.44□□□□□ -0.42
COBLL1-221ENST00000493868 ITGAEP38570 1179 aa12.41□□□□□ -0.42
COBLL1-221ENST00000493868 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
COBLL1-221ENST00000493868 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.43
COBLL1-221ENST00000493868 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
COBLL1-221ENST00000493868 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
COBLL1-221ENST00000493868 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
COBLL1-221ENST00000493868 FAM50AQ14320 339 aaKnown RBP12.26□□□□□ -0.45
COBLL1-221ENST00000493868 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
COBLL1-221ENST00000493868 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
COBLL1-221ENST00000493868 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
COBLL1-221ENST00000493868 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.46
COBLL1-221ENST00000493868 ANP32CO43423 234 aa12.2□□□□□ -0.46
COBLL1-221ENST00000493868 POLR3GLQ9BT43 218 aa12.2□□□□□ -0.46
COBLL1-221ENST00000493868 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
COBLL1-221ENST00000493868 NEUROD1Q13562 356 aa12.14□□□□□ -0.47
COBLL1-221ENST00000493868 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
COBLL1-221ENST00000493868 EEA1Q15075 1411 aa12.13□□□□□ -0.47
COBLL1-221ENST00000493868 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
COBLL1-221ENST00000493868 RB1CC1Q8TDY2 1594 aa12.11□□□□□ -0.47
COBLL1-221ENST00000493868 NACADO15069 1562 aa12.11□□□□□ -0.47
COBLL1-221ENST00000493868 CDK11AQ9UQ88 783 aaPredicted RBP12.1□□□□□ -0.47
COBLL1-221ENST00000493868 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
COBLL1-221ENST00000493868 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
COBLL1-221ENST00000493868 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
COBLL1-221ENST00000493868 BCANQ96GW7 911 aa11.97□□□□□ -0.49
COBLL1-221ENST00000493868 CLIP1P30622 1438 aa11.96□□□□□ -0.5
COBLL1-221ENST00000493868 CNGB1Q14028 1251 aaPredicted RBP11.95□□□□□ -0.5
COBLL1-221ENST00000493868 TONSLQ96HA7 1378 aa11.95□□□□□ -0.5
COBLL1-221ENST00000493868 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
COBLL1-221ENST00000493868 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
COBLL1-221ENST00000493868 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
COBLL1-221ENST00000493868 CEP164Q9UPV0 1460 aa11.9□□□□□ -0.5
COBLL1-221ENST00000493868 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
COBLL1-221ENST00000493868 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
COBLL1-221ENST00000493868 P3H3Q8IVL6 736 aa11.87□□□□□ -0.51
COBLL1-221ENST00000493868 ZNF326Q5BKZ1 582 aaKnown RBP11.87□□□□□ -0.51
COBLL1-221ENST00000493868 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
COBLL1-221ENST00000493868 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
COBLL1-221ENST00000493868 FKBP8Q14318 412 aa11.84□□□□□ -0.51
COBLL1-221ENST00000493868 BAZ1BQ9UIG0 1483 aaKnown RBP11.81□□□□□ -0.52
COBLL1-221ENST00000493868 DDX10Q13206 875 aaKnown RBP11.78□□□□□ -0.52
COBLL1-221ENST00000493868 MIER1Q8N108 512 aa11.77□□□□□ -0.52
COBLL1-221ENST00000493868 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.52
COBLL1-221ENST00000493868 KIF27Q86VH2 1401 aa11.77□□□□□ -0.52
COBLL1-221ENST00000493868 MTUS2Q5JR59 1369 aa11.76□□□□□ -0.53
COBLL1-221ENST00000493868 HNRNPUQ00839 825 aaKnown RBP eCLIP11.76□□□□□ -0.53
COBLL1-221ENST00000493868 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
COBLL1-221ENST00000493868 FBLN2P98095 1184 aa11.74□□□□□ -0.53
COBLL1-221ENST00000493868 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
COBLL1-221ENST00000493868 NEFMP07197 916 aa11.71□□□□□ -0.53
COBLL1-221ENST00000493868 GLIPR1L2Q4G1C9 344 aa11.68□□□□□ -0.54
COBLL1-221ENST00000493868 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
COBLL1-221ENST00000493868 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
COBLL1-221ENST00000493868 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.54
COBLL1-221ENST00000493868 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
COBLL1-221ENST00000493868 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.67□□□□□ -0.54
COBLL1-221ENST00000493868 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
COBLL1-221ENST00000493868 FHAD1B1AJZ9 1412 aa11.66□□□□□ -0.54
COBLL1-221ENST00000493868 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
COBLL1-221ENST00000493868 TMC1Q8TDI8 760 aa11.65□□□□□ -0.55
COBLL1-221ENST00000493868 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
COBLL1-221ENST00000493868 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
COBLL1-221ENST00000493868 MRS2Q9HD23 443 aa11.63□□□□□ -0.55
COBLL1-221ENST00000493868 CCDC136Q96JN2 1154 aa11.63□□□□□ -0.55
COBLL1-221ENST00000493868 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
COBLL1-221ENST00000493868 SMARCA2P51531 1590 aa11.63□□□□□ -0.55
COBLL1-221ENST00000493868 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms